Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1160 |
Symbol | |
ID | 8752821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1222308 |
End bp | 1225961 |
Gene Length | 3654 bp |
Protein Length | 1217 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | WD40 repeat, subgroup |
Protein accession | YP_003408287 |
Protein GI | 284989733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCA CCGACACGCC CTCGCGGGTC GGCAACCCCT ACGTCGGCCC GACCTCCTTC CGTCTTGGCG ACGCTCTCTA TGGACGGGAC CGCGAGCGCG AGGAACTGGT CGACCTGCTC GAAGCTGAAC GGATCGTCCT GATTTACTCG CCCTCCGGCG CCGGGAAGAC GTCGCTGATC GAGGCCGCCC TGGTTCCGGC CCTGCGGGAC GACGGATTCG AGGTGCTGCC GGTCATCCGG GTCACCCACC CGCTGGAATC CCGGCCCGGA GCTCCCACGC CCCGCAACCG CTACGTGATG AGCGCACTGC TGTCCCTCGA GGAAGGCCTG CCGCCGGAGC GACAACGACC GGTCGCAGAG CTGGCGACCC TGACGCTGCG CGAGTACCTG GCGGTCCGCG CCGACCGGGA CGGCCGTCCA GGCAACGAGG TGTTCATCTT CGACCAGTTC GAGGAGGTGC TCACCGCCGA CCCCACCGAC GAGCCGGCCA AGCACGCGTT CTTCAAGGAG CTCGGCCAGA CGCTGCGCGA CCAGGACTAC TGGGCGCTGT TCTTGATGCG GGAGGACTTC CTCGCCGCCC TGGACCCCTA CCTGCGGCAT GTCCCAACGC GGCTGCGGAC GAGGTTCCGG CTGGACCTGC TCTCCGCGGA CCAGGCACTC GAGGCGATCC GCCGACCGGC GGAGCGGGCC GGCGTCGACT TCACCGAGGA GGCCGCCCGG CAGCTGGTCG ACGACCTGCG CACCGTGCGG GTGCAGCGGC CGGACGGGGT CACCGAGGTG CTCGGCTCCT ACGTCGAGCC GGTCCAGCTG CAGGTCACCT GCCACCTGCT GTGGTCGATG CTGCCACCTG GTGCCTCGGA GATCACCCGT GCCGACGTCG AGGCCCTGGG GCGGGTGGAC CAGGCGCTGG CCGGCTACTA CGCCGAGCGG GTCCGCGCGG CCGCGGAGCG CACCGGGGTA CCCGAGCGAG CCATCCGGGA GTGGTTCGAG GAGCGGCTCA TCACCCCGCA GGGGCTGCGC AGCCAGGTGC TCGAGGGACC CGCGCCCTCC GGGGAGGGCG GGTACCGCCT GCTGGGCGAG CTGCTCGACG CCCACCTCGT CCGCGCGGAG ACCCGCCGGC AGGCCACCTG GTACGAGCTG GCCCACGACC GGCTGATCGA ACCCGTCCAA CGGGACAACG CCGCCTGGCT CGCCCAGCAC CTGTCCCCCG TGGAGCGGGC GGCCACGCTG TGGGAGCAAG AGTGCAGGCC GGACCGCCTG CTGCTGCTCG GCGCTGACCT CGCCGCCGCG GAGGAGGACG ACGCAGTCCG GGCCGGCAAG CTCACGCACC GGCAGCGAGA GTTTCTCGAG GCGTCGCGGC GAGCAGCGGA GCGGAGCGCC CGCCGCCGCC TGCGTCGCGC GAGCTTGATT GCGGCAACCA TGGCCCTGCT CCTGATCTCT GCCTTGGTGC TCGGCGTCAT CGCCTGGAGG AACGCCGCAA ATGCCCGGGC GGCGTCCGCT TTGGCCTCGG CGCGGGAGCT GGCAGCCGGT GCGGACCGGC TGGTCAGCAC GCGCCCGGAC CTGGCCATCC TGCTGGGCCT GCAGAGCCTA AGTCTCGCGG GCGACCAGGA CCGGTCCCCT CCCGCCGGAC TGATAACCGC ACTCTCCCAG CTCACCCACC GCACTGCGTG GGTGTCCGAC GGCCACGACG GGGCGGTGTT CGGCGTGGCG TTCAGCCCGG ACGGTGCTGT GCTGGCCGGC GCCGGCGCCG ACGGAACGGT GCGGCTGTGG GATGCCGCCA CCGGCCGAGC GCGCGGCGCG CCGCTGACCG GCCACACCGA CGCGGTGACC GCGGTGGCGT TCAGCCCGGA CGGTGCTGTG CTGGCCAGCG CTGGCGCCGA CGGGACGGTG CGGCTGTGGG ACCCCGCCAC CGGTCGGCCG CGCGGCGCGC CGCTAGCCGG CCACACCGAC GCCGTCAACG CCGTGGCGTT CAACCCGGAC GGGACCCTGC TCGTCAGCGC TGGAACCGAC CGGACGATCC GGTTGTGGGA CACAGCGACC GGCCGAGGGC GCGGCGAGCT GGCCGGTGTG GCCGGCCACG CTGGTGCGGT CAACGCGGTG GCGTTCAGCC CCGACGGGTC TCTGCTGGCC AGCGCCGGCG CCGACGGGAC GGTGCGGCTG TGGGACCCCG CCACCGGGGG ACCGCACGGC GCGCCGCTGG CCGGTCAAGC GGGTCACGTC GGCGCGGTGA ACGCCGTGGC GTTCAGCCCC GCCCCCGACG GCTCCCTGCT GGCCACCGCC GGCGCCGACC GGACGGTGCG GCTGTGGAAT CCGGCCACCG GCCAGCCGCG CGGTGTGCCG CTGGAAGGTC ACGTCGGCGC GGTGAACGGC GTGGCGTTCA GCCCCGACGG CACCCTGCTG GCCACCGCCG GCGCCGACGC GACGGTGCGG CTGTGGAATC CGGCCACCGG CCGGCCGCGC GGCGGTCCGC TGGCCGGCCA CGACGGCGCG GTGACCGCCG TAGCGTTCAG CCCCGACGGG GCCTCATTGG GCAGCGCCGG CACCGACCAA ACGGCGCGAA TCTGGGAGGT CGCCGACACC TATTCCGTCA GCCGGCGGCT GGCCGGTGAC CCCGGCCTGG TCTACGAGGT GGCATTCAGC CCGGACGGCG CGCTGCTAAG CACCGCCGGT CGCAACGGGA GGGTGCGGCT GTGGGATCCC GTCACGGGTG AGCCGCGGGG CGCGCCGCTG TTCGGCCACA GCGGCGCGGT GAACGGCGTG GCGTTCAGCC CCGACGGCAC CCTGCTGGCC AGCGCCAGCG TCGACGAGAT GGCGTTGTTG TGGGACCCCG CCACCGGCCG GCCGCAGGGT GCGCTGCTGA CCACCCACGG CGGCCCGGTG AACGCCGTGG CGTTCAGCCC CGATGGCACG CCGCTAGCCA CCGCGAGTGA GGACGGAACG GTGCAGTTGT GGGATGCCGC CACGGGCGAG CCGCAGGGTG CGCCGCTGAC CGGGCACACC GACGCGGTGA ACGGCGTGGC GTTCAGCCCC GACGGCACCC TGCTGGCCAG CGCCGGCTCC GACCGGACGG TGCGGCTGTG GAATCCGGCC ACCGGCCGGC CCCACCGCGA GCCGCTGGGC GGTCACGTCG GCGCGGTGAA CGGCGTGGCG TTCAGCCCCG ACGGCACGCT GCTGGCGACC GCCGGCGCCG ACGGAACGGT GCGGCTGTGG AATCCGGCCA CCGGCCGGCC CCACCGCGAG CCGCTGACCG GCCACACCGA CGCGGTGAAC GCGGTGGCGT TCAGCCCCGA CGGGACCCTG CTGGTCAGCG CCGGCGCCGA CGGAACGACG TTGTTGTGGG ACCCTGCCAC CGGCCAGCCG TACGGCGAGC CGCTCGAAGG TAACAGCGGC GTGGTCTGGA GTGCGGCGTT CAGCCTCGAC GGGCGCCTAC TGGCCACCAC CACCGATAAG ACGTTGCAGC TGTGGGACCT GAGCTGGTGG GAGGAGCCGC CCTCTGCCTG GGCTGAGGCC GGCTGCAGGC TGGTCAACCG CAACTTGTCC GCAGACGAAT GGAACCAGTT CGCCGGGGAT CTGCCGTACC AGCGGACCTG CCCGGGACTA CCTTCCGGGG AGCGTGCACC GAGCAATGCC ATCGCAGCCG ACTACTCACC GTGA
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Protein sequence | MTATDTPSRV GNPYVGPTSF RLGDALYGRD REREELVDLL EAERIVLIYS PSGAGKTSLI EAALVPALRD DGFEVLPVIR VTHPLESRPG APTPRNRYVM SALLSLEEGL PPERQRPVAE LATLTLREYL AVRADRDGRP GNEVFIFDQF EEVLTADPTD EPAKHAFFKE LGQTLRDQDY WALFLMREDF LAALDPYLRH VPTRLRTRFR LDLLSADQAL EAIRRPAERA GVDFTEEAAR QLVDDLRTVR VQRPDGVTEV LGSYVEPVQL QVTCHLLWSM LPPGASEITR ADVEALGRVD QALAGYYAER VRAAAERTGV PERAIREWFE ERLITPQGLR SQVLEGPAPS GEGGYRLLGE LLDAHLVRAE TRRQATWYEL AHDRLIEPVQ RDNAAWLAQH LSPVERAATL WEQECRPDRL LLLGADLAAA EEDDAVRAGK LTHRQREFLE ASRRAAERSA RRRLRRASLI AATMALLLIS ALVLGVIAWR NAANARAASA LASARELAAG ADRLVSTRPD LAILLGLQSL SLAGDQDRSP PAGLITALSQ LTHRTAWVSD GHDGAVFGVA FSPDGAVLAG AGADGTVRLW DAATGRARGA PLTGHTDAVT AVAFSPDGAV LASAGADGTV RLWDPATGRP RGAPLAGHTD AVNAVAFNPD GTLLVSAGTD RTIRLWDTAT GRGRGELAGV AGHAGAVNAV AFSPDGSLLA SAGADGTVRL WDPATGGPHG APLAGQAGHV GAVNAVAFSP APDGSLLATA GADRTVRLWN PATGQPRGVP LEGHVGAVNG VAFSPDGTLL ATAGADATVR LWNPATGRPR GGPLAGHDGA VTAVAFSPDG ASLGSAGTDQ TARIWEVADT YSVSRRLAGD PGLVYEVAFS PDGALLSTAG RNGRVRLWDP VTGEPRGAPL FGHSGAVNGV AFSPDGTLLA SASVDEMALL WDPATGRPQG ALLTTHGGPV NAVAFSPDGT PLATASEDGT VQLWDAATGE PQGAPLTGHT DAVNGVAFSP DGTLLASAGS DRTVRLWNPA TGRPHREPLG GHVGAVNGVA FSPDGTLLAT AGADGTVRLW NPATGRPHRE PLTGHTDAVN AVAFSPDGTL LVSAGADGTT LLWDPATGQP YGEPLEGNSG VVWSAAFSLD GRLLATTTDK TLQLWDLSWW EEPPSAWAEA GCRLVNRNLS ADEWNQFAGD LPYQRTCPGL PSGERAPSNA IAADYSP
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