| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1160 |
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| Symbol | |
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| ID | 8752821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | + |
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| Start bp | 1222308 |
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| End bp | 1225961 |
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| Gene Length | 3654 bp |
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| Protein Length | 1217 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | WD40 repeat, subgroup |
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| Protein accession | YP_003408287 |
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| Protein GI | 284989733 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA CCGACACGCC CTCGCGGGTC GGCAACCCCT ACGTCGGCCC GACCTCCTTC
CGTCTTGGCG ACGCTCTCTA TGGACGGGAC CGCGAGCGCG AGGAACTGGT CGACCTGCTC
GAAGCTGAAC GGATCGTCCT GATTTACTCG CCCTCCGGCG CCGGGAAGAC GTCGCTGATC
GAGGCCGCCC TGGTTCCGGC CCTGCGGGAC GACGGATTCG AGGTGCTGCC GGTCATCCGG
GTCACCCACC CGCTGGAATC CCGGCCCGGA GCTCCCACGC CCCGCAACCG CTACGTGATG
AGCGCACTGC TGTCCCTCGA GGAAGGCCTG CCGCCGGAGC GACAACGACC GGTCGCAGAG
CTGGCGACCC TGACGCTGCG CGAGTACCTG GCGGTCCGCG CCGACCGGGA CGGCCGTCCA
GGCAACGAGG TGTTCATCTT CGACCAGTTC GAGGAGGTGC TCACCGCCGA CCCCACCGAC
GAGCCGGCCA AGCACGCGTT CTTCAAGGAG CTCGGCCAGA CGCTGCGCGA CCAGGACTAC
TGGGCGCTGT TCTTGATGCG GGAGGACTTC CTCGCCGCCC TGGACCCCTA CCTGCGGCAT
GTCCCAACGC GGCTGCGGAC GAGGTTCCGG CTGGACCTGC TCTCCGCGGA CCAGGCACTC
GAGGCGATCC GCCGACCGGC GGAGCGGGCC GGCGTCGACT TCACCGAGGA GGCCGCCCGG
CAGCTGGTCG ACGACCTGCG CACCGTGCGG GTGCAGCGGC CGGACGGGGT CACCGAGGTG
CTCGGCTCCT ACGTCGAGCC GGTCCAGCTG CAGGTCACCT GCCACCTGCT GTGGTCGATG
CTGCCACCTG GTGCCTCGGA GATCACCCGT GCCGACGTCG AGGCCCTGGG GCGGGTGGAC
CAGGCGCTGG CCGGCTACTA CGCCGAGCGG GTCCGCGCGG CCGCGGAGCG CACCGGGGTA
CCCGAGCGAG CCATCCGGGA GTGGTTCGAG GAGCGGCTCA TCACCCCGCA GGGGCTGCGC
AGCCAGGTGC TCGAGGGACC CGCGCCCTCC GGGGAGGGCG GGTACCGCCT GCTGGGCGAG
CTGCTCGACG CCCACCTCGT CCGCGCGGAG ACCCGCCGGC AGGCCACCTG GTACGAGCTG
GCCCACGACC GGCTGATCGA ACCCGTCCAA CGGGACAACG CCGCCTGGCT CGCCCAGCAC
CTGTCCCCCG TGGAGCGGGC GGCCACGCTG TGGGAGCAAG AGTGCAGGCC GGACCGCCTG
CTGCTGCTCG GCGCTGACCT CGCCGCCGCG GAGGAGGACG ACGCAGTCCG GGCCGGCAAG
CTCACGCACC GGCAGCGAGA GTTTCTCGAG GCGTCGCGGC GAGCAGCGGA GCGGAGCGCC
CGCCGCCGCC TGCGTCGCGC GAGCTTGATT GCGGCAACCA TGGCCCTGCT CCTGATCTCT
GCCTTGGTGC TCGGCGTCAT CGCCTGGAGG AACGCCGCAA ATGCCCGGGC GGCGTCCGCT
TTGGCCTCGG CGCGGGAGCT GGCAGCCGGT GCGGACCGGC TGGTCAGCAC GCGCCCGGAC
CTGGCCATCC TGCTGGGCCT GCAGAGCCTA AGTCTCGCGG GCGACCAGGA CCGGTCCCCT
CCCGCCGGAC TGATAACCGC ACTCTCCCAG CTCACCCACC GCACTGCGTG GGTGTCCGAC
GGCCACGACG GGGCGGTGTT CGGCGTGGCG TTCAGCCCGG ACGGTGCTGT GCTGGCCGGC
GCCGGCGCCG ACGGAACGGT GCGGCTGTGG GATGCCGCCA CCGGCCGAGC GCGCGGCGCG
CCGCTGACCG GCCACACCGA CGCGGTGACC GCGGTGGCGT TCAGCCCGGA CGGTGCTGTG
CTGGCCAGCG CTGGCGCCGA CGGGACGGTG CGGCTGTGGG ACCCCGCCAC CGGTCGGCCG
CGCGGCGCGC CGCTAGCCGG CCACACCGAC GCCGTCAACG CCGTGGCGTT CAACCCGGAC
GGGACCCTGC TCGTCAGCGC TGGAACCGAC CGGACGATCC GGTTGTGGGA CACAGCGACC
GGCCGAGGGC GCGGCGAGCT GGCCGGTGTG GCCGGCCACG CTGGTGCGGT CAACGCGGTG
GCGTTCAGCC CCGACGGGTC TCTGCTGGCC AGCGCCGGCG CCGACGGGAC GGTGCGGCTG
TGGGACCCCG CCACCGGGGG ACCGCACGGC GCGCCGCTGG CCGGTCAAGC GGGTCACGTC
GGCGCGGTGA ACGCCGTGGC GTTCAGCCCC GCCCCCGACG GCTCCCTGCT GGCCACCGCC
GGCGCCGACC GGACGGTGCG GCTGTGGAAT CCGGCCACCG GCCAGCCGCG CGGTGTGCCG
CTGGAAGGTC ACGTCGGCGC GGTGAACGGC GTGGCGTTCA GCCCCGACGG CACCCTGCTG
GCCACCGCCG GCGCCGACGC GACGGTGCGG CTGTGGAATC CGGCCACCGG CCGGCCGCGC
GGCGGTCCGC TGGCCGGCCA CGACGGCGCG GTGACCGCCG TAGCGTTCAG CCCCGACGGG
GCCTCATTGG GCAGCGCCGG CACCGACCAA ACGGCGCGAA TCTGGGAGGT CGCCGACACC
TATTCCGTCA GCCGGCGGCT GGCCGGTGAC CCCGGCCTGG TCTACGAGGT GGCATTCAGC
CCGGACGGCG CGCTGCTAAG CACCGCCGGT CGCAACGGGA GGGTGCGGCT GTGGGATCCC
GTCACGGGTG AGCCGCGGGG CGCGCCGCTG TTCGGCCACA GCGGCGCGGT GAACGGCGTG
GCGTTCAGCC CCGACGGCAC CCTGCTGGCC AGCGCCAGCG TCGACGAGAT GGCGTTGTTG
TGGGACCCCG CCACCGGCCG GCCGCAGGGT GCGCTGCTGA CCACCCACGG CGGCCCGGTG
AACGCCGTGG CGTTCAGCCC CGATGGCACG CCGCTAGCCA CCGCGAGTGA GGACGGAACG
GTGCAGTTGT GGGATGCCGC CACGGGCGAG CCGCAGGGTG CGCCGCTGAC CGGGCACACC
GACGCGGTGA ACGGCGTGGC GTTCAGCCCC GACGGCACCC TGCTGGCCAG CGCCGGCTCC
GACCGGACGG TGCGGCTGTG GAATCCGGCC ACCGGCCGGC CCCACCGCGA GCCGCTGGGC
GGTCACGTCG GCGCGGTGAA CGGCGTGGCG TTCAGCCCCG ACGGCACGCT GCTGGCGACC
GCCGGCGCCG ACGGAACGGT GCGGCTGTGG AATCCGGCCA CCGGCCGGCC CCACCGCGAG
CCGCTGACCG GCCACACCGA CGCGGTGAAC GCGGTGGCGT TCAGCCCCGA CGGGACCCTG
CTGGTCAGCG CCGGCGCCGA CGGAACGACG TTGTTGTGGG ACCCTGCCAC CGGCCAGCCG
TACGGCGAGC CGCTCGAAGG TAACAGCGGC GTGGTCTGGA GTGCGGCGTT CAGCCTCGAC
GGGCGCCTAC TGGCCACCAC CACCGATAAG ACGTTGCAGC TGTGGGACCT GAGCTGGTGG
GAGGAGCCGC CCTCTGCCTG GGCTGAGGCC GGCTGCAGGC TGGTCAACCG CAACTTGTCC
GCAGACGAAT GGAACCAGTT CGCCGGGGAT CTGCCGTACC AGCGGACCTG CCCGGGACTA
CCTTCCGGGG AGCGTGCACC GAGCAATGCC ATCGCAGCCG ACTACTCACC GTGA
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| Protein sequence | MTATDTPSRV GNPYVGPTSF RLGDALYGRD REREELVDLL EAERIVLIYS PSGAGKTSLI
EAALVPALRD DGFEVLPVIR VTHPLESRPG APTPRNRYVM SALLSLEEGL PPERQRPVAE
LATLTLREYL AVRADRDGRP GNEVFIFDQF EEVLTADPTD EPAKHAFFKE LGQTLRDQDY
WALFLMREDF LAALDPYLRH VPTRLRTRFR LDLLSADQAL EAIRRPAERA GVDFTEEAAR
QLVDDLRTVR VQRPDGVTEV LGSYVEPVQL QVTCHLLWSM LPPGASEITR ADVEALGRVD
QALAGYYAER VRAAAERTGV PERAIREWFE ERLITPQGLR SQVLEGPAPS GEGGYRLLGE
LLDAHLVRAE TRRQATWYEL AHDRLIEPVQ RDNAAWLAQH LSPVERAATL WEQECRPDRL
LLLGADLAAA EEDDAVRAGK LTHRQREFLE ASRRAAERSA RRRLRRASLI AATMALLLIS
ALVLGVIAWR NAANARAASA LASARELAAG ADRLVSTRPD LAILLGLQSL SLAGDQDRSP
PAGLITALSQ LTHRTAWVSD GHDGAVFGVA FSPDGAVLAG AGADGTVRLW DAATGRARGA
PLTGHTDAVT AVAFSPDGAV LASAGADGTV RLWDPATGRP RGAPLAGHTD AVNAVAFNPD
GTLLVSAGTD RTIRLWDTAT GRGRGELAGV AGHAGAVNAV AFSPDGSLLA SAGADGTVRL
WDPATGGPHG APLAGQAGHV GAVNAVAFSP APDGSLLATA GADRTVRLWN PATGQPRGVP
LEGHVGAVNG VAFSPDGTLL ATAGADATVR LWNPATGRPR GGPLAGHDGA VTAVAFSPDG
ASLGSAGTDQ TARIWEVADT YSVSRRLAGD PGLVYEVAFS PDGALLSTAG RNGRVRLWDP
VTGEPRGAPL FGHSGAVNGV AFSPDGTLLA SASVDEMALL WDPATGRPQG ALLTTHGGPV
NAVAFSPDGT PLATASEDGT VQLWDAATGE PQGAPLTGHT DAVNGVAFSP DGTLLASAGS
DRTVRLWNPA TGRPHREPLG GHVGAVNGVA FSPDGTLLAT AGADGTVRLW NPATGRPHRE
PLTGHTDAVN AVAFSPDGTL LVSAGADGTT LLWDPATGQP YGEPLEGNSG VVWSAAFSLD
GRLLATTTDK TLQLWDLSWW EEPPSAWAEA GCRLVNRNLS ADEWNQFAGD LPYQRTCPGL
PSGERAPSNA IAADYSP
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