| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1074 |
|---|
| Symbol | |
|---|
| ID | 8752735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 1134893 |
|---|
| End bp | 1136563 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | nitrite and sulphite reductase 4Fe-4S region |
|---|
| Protein accession | YP_003408204 |
|---|
| Protein GI | 284989650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0746532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGACCC CCCGCACCAG CAACAGGCCC CAGCGTGGCC AGGGCCAGTG GGCGCTGGGC
TACCGGGAGC CGCTCAACCC CAACGAGCGG ATGAAGAAGG ACGCCGACGG CCTCACGGTG
CGTCAGCGGG TCCTCGACAT CTACGCGCAC ACCGGCTTCG GGGGCATCGA CCCGGGCGAC
CTGCGCGGTC GCATGCGCTG GATGGGGCTC TACACCCAGC GGGCGCAGGG CATCCCCGGC
GGGAAGACCG CCGTGCTGGA GCCCGAGGAG CTCGAGGACT CCTACTTCAT GATGCGGGTG
CGGACCGACG GCGGGGCGCT GACCAGCGCC CAGCTGCGGA CCATCGGCGG CATCAGCACC
GAGTTCGGCC GCGACGTCGC CGACGTCACC GACAGGCAGA ACATCCAGTA CCACTGGATC
CGCATCGAGG ACGTCCCCGA GATTTGGCGC CGGCTCGAGG CGGTCGGCCT CACCACGACC
GAGGCCTGCG GCGACACCCC CCGCGGCATG CTCAACTGCC CGCTGGCCGG CGTCCTGGAG
GACGAGGTCC TCGACGCCTC CGACGTCATG GCGCAGACGG TGGCCAGGTA CGTCGGCAGC
CCCGAGTTCA GCAACCTGCC GCGCAAGTGG AAGACGTCGA TGTCCGGCTG CGTCGACCAC
TGCACCGAGC CGGAGATCGA CGACATCTCC TTCGTCGGGG TGCGCAACGC CGACGGCGAG
GCCGGTTACG ACCTGTGGGT CGGCGGCGGC CTGTCGACCA ACCCGATGTT CGCCAAGCGG
CTCGGCGTCT TCGTGCGGCC CGACCAGGTG ACCGACGTCT GGGCGGCCTG CACCTCGATC
TTCCGGGACT ACGGCTACCG CCGGCAGCGC AACCGCGCCC GCATCAAGTT CCTCGTGGCC
GACTGGGGCC CGGAGAAGTT CCGCCAGGTG CTGGAGGACG AGTACCTGCA CGACAAGCTC
CCCGACGGCC CCGCCGCCGC TCCGCCGAAG CACGAGCAGC GCGACCACGT CGGCGTCGCC
CGGCAGAAGG ACGGCACCAA CGCCGTCGGC TTCGCGCTGC GCACCGGCCG GATCACCGGC
AGCCTGCTCA CCCGGATCGC CGACCTCGCC GACGAGTACG GGCAGGGGCG CACCCGGACG
ACGACCCAGC AGAAGATGGT CGTCCTCGAC GTCCCCGACG AGCGGGTCGA GGACCTCGTC
GCGGCGCTGG CCGAGCACGA CCTGCTGGTG CGCCCGAGCG CGTTCCGGCG CGGCACGATG
GCCTGCACCG GGCTGGAGTT CTGCAAGCTC GCGATCGTCG AGACCAAGCA GCACGCCCAG
GACCTCTACG CCGAGCTGGA GAAGCGGCTG CCGGACTTCG ACGAGCCGAT CGGCATCAAC
GTCAACGGCT GCCCGAACAG CTGCGCCCGG TTCCAGACCG CCGACATCGG CTTCAAGGGC
TCGATGGTGC GCGACGACAG CGGCGAGATG GTCGAGGGCT TCCAGGTGCA CCTGGGCGGC
CACCTCGGCA CCGAGGCCGC CTTCGGCCGC AAGTTCCGCG GCCACAAGGT GACCAAGGCC
GAGAGCGCCG ACTACTGCGA GCGGGTGCTG CGCGGCTACC TCGAGCGCCG GGAGCCCGGC
GAGCGGTTCG CCGCCTACGT GGCGCGGGCC GAGGAGGCGT GGCTGCTCTG A
|
|---|
| Protein sequence | MTTPRTSNRP QRGQGQWALG YREPLNPNER MKKDADGLTV RQRVLDIYAH TGFGGIDPGD
LRGRMRWMGL YTQRAQGIPG GKTAVLEPEE LEDSYFMMRV RTDGGALTSA QLRTIGGIST
EFGRDVADVT DRQNIQYHWI RIEDVPEIWR RLEAVGLTTT EACGDTPRGM LNCPLAGVLE
DEVLDASDVM AQTVARYVGS PEFSNLPRKW KTSMSGCVDH CTEPEIDDIS FVGVRNADGE
AGYDLWVGGG LSTNPMFAKR LGVFVRPDQV TDVWAACTSI FRDYGYRRQR NRARIKFLVA
DWGPEKFRQV LEDEYLHDKL PDGPAAAPPK HEQRDHVGVA RQKDGTNAVG FALRTGRITG
SLLTRIADLA DEYGQGRTRT TTQQKMVVLD VPDERVEDLV AALAEHDLLV RPSAFRRGTM
ACTGLEFCKL AIVETKQHAQ DLYAELEKRL PDFDEPIGIN VNGCPNSCAR FQTADIGFKG
SMVRDDSGEM VEGFQVHLGG HLGTEAAFGR KFRGHKVTKA ESADYCERVL RGYLERREPG
ERFAAYVARA EEAWLL
|
|---|
| |