Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_0902 |
Symbol | |
ID | 8752561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 956169 |
End bp | 957962 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | methionyl-tRNA synthetase |
Protein accession | YP_003408035 |
Protein GI | 284989481 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.320514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTGATC GGCACATCCT GACCGCCGTG GCCTGGCCCT ACGCCAACGG CCCGCGGCAC ATCGGCCACG TCTCCGGCTT CGGCGTCCCC TCCGACGTCT TCAGCCGCTA CCACCGCATG GTGGGTGACC GGGTGCTGAT GGTCAGCGGC ACCGACGAGC ACGGCACGCC GATCACCGTC GCCGCCGACG CGGAGGGCGT GAGCCCGCGG GAGATCGCCG ACCGCAACAA CCGGGTCATC GTCGGCGACC TGCAGTCGCT CGGGCTGTCC TACGACCTGT TCACCCGGAC GACCACGGGC AACCACGCGG CGATCAGCCA GGAGATCTTC CTCGGCCTGC TCAAGAACGG GTACGTCTTC CCGAAGACGA CGCTCGGCGC GATCAGCCCG TCGACCGGGC GCACCCTGCC CGACCGCTAC ATCGAGGGCA CCTGCCCGAT CTGCGGCTAC GACGGCGCCC GCGGTGACCA GTGCGACAAC TGCGGCAACC AGCTGGACCC GGTCGACCTG ATCAACCCCC GGAGCCGGAT CAACGGCGAG ACGCCGAAGT TCGTGGAGGA GGAGCACTAC TTCCTCGACC TGCCGGCCTT CACCCGCTCG CTGGGCGACT GGCTGGACAG CCGCAAGGGG TGGCGGCCCA ACGTCCTCAA CTTCGCGAAG AACCTGCTCA CCGACCTCAA GCCGCGCAGC TACACCCGCG ACATCGACTG GGGCGTGCCG GTGCCGCTCG AGGGCTGGCG CGATCGCCCC GACAAGCGCA TCTACGTCTG GTTCGACGCC GTCGTCGGCT ACCTGTCGGC CTCCATCGAG TGGGCGCGCC GCTCCGGGGA CGACGACGCG TGGCGCCAGT GGTGGCAGAC GCCGGACGCG TCCGCCTACT ACTTCATGGG CAAGGACAAC ATCGTCTTCC ACGCCGAGAT CTGGCCCGCC CAGCTGCTCG GCTACAACGG CGAGGGCGAC AAGGGCGGCA CCCCGGGCTC GCTGGGCCGG CTCAACCTGC CCACCGAGGT GGTCTCCAGC GAGTTCCTGA CCATGGAGGG GCGCAAGTTC AGCTCGTCCC GCCAGGTCGT CATCTACGTG CGCGACTTCC TGGCCCGCTA CGACGCCGAC GCGCTGCGCT ACTTCATCGC CGCGGCCGGG CCGGAGTCCC AGGACACCGA CTTCACCTGG GCGGAGTTCC TGCGCCGCAA CAACGACGAG CTGGTCGCCG GGTGGGGCAA CCTGGTCAAC CGCACGGTGT CGATGGCCGC GAAGAACGTC GGCGCCGTCC CGACCCCGGG GGAGCTGACC GACGCCGACC GAGCGCTGCT GGGCACGACC TCGGGCGCGT TCGGGCCGGT CGGCGAGCTG CTGTCGCGCA ACCGGCAAAA GGCCGCGGCC GCGGAGGCGA TGCGGGTGGT CGGGGAGGCC AACAAGTACC TGTCCGACCA GGCGCCGTGG AAGCTCAAGG AGGACCCGGC CCGCCGGGAC ACCGTGCTGC ACACCGCGCT GCAGGCGGTC AGCGACTGCA ACGCGCTGCT CACCCCGTTC CTCCCGCACT CCGCGCAGAA GGTGCACGAG CTGCTCGGCG GGACCGGCGT CTGGTCGCCG GCGCCGCGGA TCGAGGAGGT CACCGACCTC GACGACGGCT CGCCGTACCC GATCATCACC GGCGACCACG CCCAGGGGCA GGCGGTGTGG GCGTCCCGGC CGCTCCCCCC GGGGACGCCG CTGTCGCCGC CCACCCCGGT GTTCAAGAAG CTCGACGAGT CGATCGTCGA GGAGGAGCTG CGCCGGCTCG AAGGGGACGA GTGA
|
Protein sequence | MSDRHILTAV AWPYANGPRH IGHVSGFGVP SDVFSRYHRM VGDRVLMVSG TDEHGTPITV AADAEGVSPR EIADRNNRVI VGDLQSLGLS YDLFTRTTTG NHAAISQEIF LGLLKNGYVF PKTTLGAISP STGRTLPDRY IEGTCPICGY DGARGDQCDN CGNQLDPVDL INPRSRINGE TPKFVEEEHY FLDLPAFTRS LGDWLDSRKG WRPNVLNFAK NLLTDLKPRS YTRDIDWGVP VPLEGWRDRP DKRIYVWFDA VVGYLSASIE WARRSGDDDA WRQWWQTPDA SAYYFMGKDN IVFHAEIWPA QLLGYNGEGD KGGTPGSLGR LNLPTEVVSS EFLTMEGRKF SSSRQVVIYV RDFLARYDAD ALRYFIAAAG PESQDTDFTW AEFLRRNNDE LVAGWGNLVN RTVSMAAKNV GAVPTPGELT DADRALLGTT SGAFGPVGEL LSRNRQKAAA AEAMRVVGEA NKYLSDQAPW KLKEDPARRD TVLHTALQAV SDCNALLTPF LPHSAQKVHE LLGGTGVWSP APRIEEVTDL DDGSPYPIIT GDHAQGQAVW ASRPLPPGTP LSPPTPVFKK LDESIVEEEL RRLEGDE
|
| |