Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_0880 |
Symbol | |
ID | 8752538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 933012 |
End bp | 934190 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_003408013 |
Protein GI | 284989459 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCGGAC CGCTGGACGG CGTCCTCGTC GTCGACCTGA CCCGCGCCCT CGCCGGGCCG CACGCCGGGA TGATGCTCGG CGACCTCGGC GCCCGCGTCA TCAAGGTGGA GAACCCCGGC AGCGGGGACG ACACCCGCGG CTGGGGGCCG CCGTTCCTCC AGCCCGAAGG AGCCGACCGG GAGTCGACCT ACTTCCTGTC GACCAACCGC AACAAGGAGT CGGTCACCCT CGACCTCAAG GACGACGGCG ACAAGGAGCT GCTGCGCGAG CTCGTCCGCC GGGCCGACGT GCTGCTGGAG AACTTCCGGC CCGGCACGCT GGCCCGGCTG GGCTTCGGCA CCGAGGTGCT CGAGCAGCTC AACCCGCGGC TGGTCACCCT CTCGATCAGC GGCTTCGGCC ACGACGGCCC CGAGGGTGGG CGGGCCGGCT ACGACCAGAT CGCCCAGGGC GAGGGCGGGC TGATGTCCCT GACCGGGGCC GGCCCGGACG ACCCGCAGCG GGTCGGCGTC CCGATCGGCG ACCTGCTGGC CGGCATGTAC GGCGCCTACG GGGTGCTGGC CGCGCTGATC GAGCGGCAGC GGACCGGCCG CGGCCAGGTC GTGCGCACCT CCCTGCTGGC GGCCATCGTC GGCGTGCACG CCTTCCAGGG CACCCGGTGG ACGGTGGCCG GCGAGGTCGG CCGCGCGCAG GGCAACCACC ACCCCTCGAT CGCGCCGTAC GGGTTGTTCC ACTGCAGGGA CGGCAGCGTG CAGCTCTCCT GCGGGTCGGA GGGGCTGTGG CGGCGGCTGT GCACCGAGTT CGGCCTCGAC GCGGAGGCGC CGGGGCTGGC CACCAACAGC GAGCGGGTGG CCAACCGGGC CCAGGTGATC GAGCTGCTGG AGCGCGCGTT CGCCGACCAC TCCCCCGAGG AGCTGCTGGC CCGGCTGGCC GACGCCGGCA TCCCGGCCGG CAAGGTGCGC ACGCTCGACG AGGTCTACAC CTGGGACCAG ACGCTGTCGC AGGGCCTGCT GATCGACGTC GAGCACGCCA CGCTCGGCCG GCTGCAGCTG CCCGGCCCGC CGCTGCGCTT CTTCGCCCCG GGTCCCGACG GCGAGACCGA GACGACCCGC CGCGAGCACG CCGCGCCGCC GGTGCTGGGG TCCTCCGACG AGGCGATCCG GGCCTGGCTG GCGCAGTGA
|
Protein sequence | MPGPLDGVLV VDLTRALAGP HAGMMLGDLG ARVIKVENPG SGDDTRGWGP PFLQPEGADR ESTYFLSTNR NKESVTLDLK DDGDKELLRE LVRRADVLLE NFRPGTLARL GFGTEVLEQL NPRLVTLSIS GFGHDGPEGG RAGYDQIAQG EGGLMSLTGA GPDDPQRVGV PIGDLLAGMY GAYGVLAALI ERQRTGRGQV VRTSLLAAIV GVHAFQGTRW TVAGEVGRAQ GNHHPSIAPY GLFHCRDGSV QLSCGSEGLW RRLCTEFGLD AEAPGLATNS ERVANRAQVI ELLERAFADH SPEELLARLA DAGIPAGKVR TLDEVYTWDQ TLSQGLLIDV EHATLGRLQL PGPPLRFFAP GPDGETETTR REHAAPPVLG SSDEAIRAWL AQ
|
| |