| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0848 |
|---|
| Symbol | |
|---|
| ID | 8752505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 900532 |
|---|
| End bp | 901341 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | DNA glycosylase/AP lyase, H2TH DNA-binding protein |
|---|
| Protein accession | YP_003407983 |
|---|
| Protein GI | 284989429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGAGG GCCACACGCT GCACCGGCTG GCCCGGGACC AGTCGCTGGC GTTCGCCGGA
CGACCCGTGC ACGTCACGAG TCCCCAGGGC CGCTTCGCCG CCGGCGCGGC GCTGCTCGAC
GACCGGGTGC TCGACGAGGT GACCGCCCAC GGCAAGCACC TGTTCGCCTG CTTCGGCGCC
GACATCCTGC ACGTGCACCT GGGGCTGTAC GGCAGCTACA CCGCCGGCAC CGGCACCCCG
CCGCCCCCGC GCGGGGCGCT GCGGATGCGC TGGCAGGGCG AGGGCCCCGA CGGCCTGGGT
GTCTGGACCG ACCTGCGCGG CGCCACCGCC TGCGAGGTCC TCGCCGCACC GGAGGTCGAC
CGCATCCTCG ACCGGCTCGG GCCCGACCCG CTGCGGCCGC GCAGCGACGG CGCGGTCGCC
CACCGGCGGA TCGCCGGCAG CCGCACCGCG ATCGGCGCGC TGCTCATGGA CCAGTCGGTG
CTCGCCGGCG TCGGCAACGT CTACCGCGCC GAGATCCTCT TCCGGCACGG CGTCTCGCCG
TTCCGTCCGG GCCGGGACGT CGACGCCGGC ACCTGGGCGG CGATGTGGGC GGACCTGGTG
GTGCTCATGC GCGCCGGCGT CCGGATGGGC CGGATCGTCA CCACCCGCCC GGAGCACCGC
ACCCGCCGCG GCGGCGCCGT CCGGCGGGAG GACGCGCACT ACGTCTACCG GCGCACCGGG
CTGCCCTGCC GGGTGTGCGC GACGCCGGTG CAGACCCAGG TGATGGTGGG CCGCAACCTC
TACTGGTGCC CGGTCTGCCA GGCCGTCTGA
|
|---|
| Protein sequence | MPEGHTLHRL ARDQSLAFAG RPVHVTSPQG RFAAGAALLD DRVLDEVTAH GKHLFACFGA
DILHVHLGLY GSYTAGTGTP PPPRGALRMR WQGEGPDGLG VWTDLRGATA CEVLAAPEVD
RILDRLGPDP LRPRSDGAVA HRRIAGSRTA IGALLMDQSV LAGVGNVYRA EILFRHGVSP
FRPGRDVDAG TWAAMWADLV VLMRAGVRMG RIVTTRPEHR TRRGGAVRRE DAHYVYRRTG
LPCRVCATPV QTQVMVGRNL YWCPVCQAV
|
|---|
| |