| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0796 |
|---|
| Symbol | |
|---|
| ID | 8752453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 848542 |
|---|
| End bp | 850338 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_003407931 |
|---|
| Protein GI | 284989377 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.42368 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGTG CAGCACGCGC GGAGGCGGTC GCCCCGCAGA GGACCAGCCG ACCGCTCCGG
GTCTGGCAGC AGGCCGCTCT GGAGAAGTAC GAGCAGGAGT CCCCCAAGGA CTTCCTGGTC
ACCGCGACCC CGGGCGCCGG CAAGACGACC TTCGCCCTCA CCCTCGCGTT CCGGCTGCTG
CAGCGGCGCG AGGTCGCCCG CGTGGTCGTC GTCTGCCCCA CCGACCACCT GCGCCTGCAG
TGGGCCGACG CCGCCGACCG GATGGGCATC GTCCTCGACC CGGGGCTGAC CAACGCCGTC
GGCCCGGTGC GCGCCGGCAC CCAGGGCTAC GTGACCACCT ACGCGCAGGT CGCCGGCAAG
CCGATGCTGC ACGCCGCCCG CTCCACCGCG GTCAAGACGC TGGTCATCCT CGACGAGGTG
CACCACGCCG GTGACGGGCT CTCCTGGGGC GAGGCGGTCG AGGAGGCCTA CGGCTTCGCC
GCGCGCCGGT TGTGCCTCAC CGGGACGCCG TTCCGCACCA AGCCCGACGA GCGCATCCCC
TTCGTCCGCT ACGAGGAGGA CGGCTTCGAG GGCGACGACG GCGAGGGCGG CATGGGGCTG
GTCAGCCGCG CCGACTACAC CTACGGCTAC AAGGAGGCGC TGGCCGACAA CGTCGTCCGC
CCGGTCGTCT TCGCCGCCTA CACCGGGACG TCGCGGTGGC GGAACTCCGC CGGCGAGGTG
GTCGCCGCCT CGCTGTCCGA GGCCGGCACC CGGTCGGTGG AGATGCAGGC CTGGCGCACC
GCGCTGGACC CCAAGGGCCA GTGGGTGCCG CACGTCATCG CGGCCATGGA CGACCGGATC
ACCCACCTGC GCGAGGACGG CGGCATGCCC GACGCCGCCG GGCTGATCCT CGCCAGCGAC
CAGGACGACG CACGCGCCTA CGCCAAGATC GTCCGCCGGG TCACCGGCAA GGCGCCCGAG
CTGATCCTCT CCGACGACCC CAAGGCGTCG AAGAGGATCG AGCGCTTCGC CAACGGCTCG
GCCCGGATCG CGGTCTGCGT GCGGATGATC TCCGAGGGCG TCGACGTCCC GCGGGCCGCC
GTCCTCGCCT GGATGACCTC CTACCGGACG CCGCTGTTCT TCGCGCAGGC CGTCGGCCGC
GTGGTCCGTG CCCGGGCCTC GCACGAGTCG GCGACGGTGT TCCTCCCCGC CGTCCGGCCG
CTGCTGGGCC TCGCCGCCTC GATGGAGGAG CAGCGCAACC ACGTCATGCC GCCGCCGAAG
ACGGTGCAGG GCGACGAGCT GGACCTGGAG CCGCTGCCTC CCAAGGAGCG CGAGCCGGTC
ACCATGAAGC AGTTCCAGGC GCTGGAGGCC GACGCCCGGT TCGCGCACGT GCTGGCCAGC
GGCACCGCGC ACACCGGTGA GGGCCGACCC GCTGCCGAGC CGCTCGCCGC CGAGGAGGAT
GACTTCCTCG GCATCCCGGG CCTGCTCACC GCCGAGCAGA CGGCGTCGCT GCTGGCCAAG
CGGGACGACG AACTGCGGAT CCGGATCGCC CAGCGCGCCC ACTCCGACGA CGACACCGGC
GAGCTGCCCA TCGTCGAGGA CCACCCCGAC GAGGACGACG CCGGCCGCTC CTGGCGTGAC
GCCGCCGAGC TCCGGCGGGA GGTCAACCGG CTCGTCGCCC GGGTCGCGGC CAAGACCTCC
AGACCGCACG GGGTGGTGCA CACCGAGCTG CGCAAGGCCG TGCCCGGCCC ACCATCGGCG
TCGGCGTCGG TCGACGTGCT GCGCGCCCGC CGCGAGCGCC TCCGCACGAT GCTCTGA
|
|---|
| Protein sequence | MASAARAEAV APQRTSRPLR VWQQAALEKY EQESPKDFLV TATPGAGKTT FALTLAFRLL
QRREVARVVV VCPTDHLRLQ WADAADRMGI VLDPGLTNAV GPVRAGTQGY VTTYAQVAGK
PMLHAARSTA VKTLVILDEV HHAGDGLSWG EAVEEAYGFA ARRLCLTGTP FRTKPDERIP
FVRYEEDGFE GDDGEGGMGL VSRADYTYGY KEALADNVVR PVVFAAYTGT SRWRNSAGEV
VAASLSEAGT RSVEMQAWRT ALDPKGQWVP HVIAAMDDRI THLREDGGMP DAAGLILASD
QDDARAYAKI VRRVTGKAPE LILSDDPKAS KRIERFANGS ARIAVCVRMI SEGVDVPRAA
VLAWMTSYRT PLFFAQAVGR VVRARASHES ATVFLPAVRP LLGLAASMEE QRNHVMPPPK
TVQGDELDLE PLPPKEREPV TMKQFQALEA DARFAHVLAS GTAHTGEGRP AAEPLAAEED
DFLGIPGLLT AEQTASLLAK RDDELRIRIA QRAHSDDDTG ELPIVEDHPD EDDAGRSWRD
AAELRREVNR LVARVAAKTS RPHGVVHTEL RKAVPGPPSA SASVDVLRAR RERLRTML
|
|---|
| |