Gene Gobs_0616 details

Gene Information

• Locus tag: Gobs_0616
• ID: 8752272
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 658000
• End bp: 659988
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 70%
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_003407767
• Protein GI: 284989213

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACGCA AGAAGATCTT CCGCTCCGTG TGGTTCTGGG TCGTCCTCGT CGTCCTCCTG 
GCGCTGGCGT TCTCCTCGCT GTTCCGCGGC ACCGGCGGTT TCCAGGAGGT CCGCACGGCG 
GTCGCGCTGG AGCAGATCCA GAACGGCAAC GCCGAACGGG TCACGATCAA CGACAAGGAA 
CAGACGCTCG ACCTCGACCT GGCCAACCCG GTCGAGGGCA GCGACCAGAT CACCGCCTCC 
TACCCGCTCG GGGCCGCCGA CGACGTCTTC GACCTGGTCT CCGGGCTGGG GAACGGCGAG 
GGCGTCGACT TCACCACCAA CGTCACGCAG GACAGCGTCC TGGTCAGCCT GCTGATCAGC 
TTCCTGCCGT TCGTGATCCT CCTGCTCCTG CTGTTCTGGC TGTTCAACTC CATGCAGGGC 
GGCGGCCGCG GGGTCATGGC CTTCGGCAAG TCCAAGGCCA AGCAGGTCAC CAAGGACACC 
CCGAAGACGA CGTTCGCCGA CGTCGCCGGC GCGGACGAGG CGATCGAGGA ACTGCACGAG 
ATCAAGGACT TCCTCGCCAA CCCGGTCAAG TTCCAGGCCG TGGGCGCGAA GATCCCCAAG 
GGCGTGCTGC TGTTCGGCCC GCCCGGCACC GGCAAGACGC TGCTGGCCCG CGCCGTGGCC 
GGCGAGGCCG GGGTGCCGTT CTTCTCCATC TCCGGGTCCG ACTTCGTCGA GATGTTCGTC 
GGTGTCGGCG CCAGCCGCGT GCGCGACCTG TTCGAGCAGG CCAAGCAGAA CGCCCCGGCG 
ATCATCTTCG TCGACGAGAT CGACGCGGTC GGCCGGCACC GCGGCGCCGG CATGGGCGGC 
GGCCACGACG AGCGCGAGCA GACGCTCAAC CAGATGCTCG TCGAGATGGA CGGCTTCGAC 
GTCAAGGGCG GCGTCATCAT GATCGCCGCC ACCAACCGGC CAGACATTCT CGACCCGGCG 
TTGCTGCGCC CGGGCCGCTT CGACCGCCAG ATCGCCGTCG ACCGCCCCGA CCTCGAGGGG 
CGCAAGCGGA TCCTCGAGGT GCACGCCAAG GGCAAGCCGC TCGCCCCGGA CGTCGACCTG 
GAGACCGTGG CCCGCCGGAC GCCGGGCTTC ACCGGCGCCG ACCTCGCCAA CGTGCTCAAC 
GAGGGCGCGC TGCTCACCGC TCGCAACAAC GGCACGGTGA TCACCGACGA CCTCCTCGAG 
GAGGCGATCG ACCGCGTCGT CGCCGGCCCG GAGCGCAAGA CGCGGGCGAT GAGCGAGAAG 
GAGAAGAAGG TCACCGCCTA CCACGAGGGC GGCCACGCCC TGGTGGCGCA CGCACTGCCC 
AACCTGGACC CGGTGCACAA GGTGACGATC CTCCCGCGCG GTCGCTCGCT CGGGCACACG 
CTCGTGCTGC CGACCGAGGA CAAGTACACC CAGACCCGGT CGGAGATGAT CGACACCCTC 
GCCTACGCCC TCGGTGGCCG GGCGGCCGAG GAGCTCGTCT TCCACGAGCC CACCACCGGC 
GCCGGCAACG ACATCGAGAA GGCGACCGCC ATGGCGCGGG CGATGGTCAC CCAGTACGGC 
ATGAGCGCCA AGCTCGGTGC GGTGAAGTAC GGGAGCACCG ATTCCGAGCC GTTCCTCGGC 
CGCGACATGG GCACCCGGCC GGACTACTCG GAGGCCGTCG CCGCCGACAT CGACGCGGAG 
ATCCGTGCCC TCATCGAGGC CGCGCACGAC GAGGCGTGGG AGATCCTGGT CGAGTACCGG 
GGCGTCCTCG ACCAGCTCGT GCTCGAGCTG ATGGAGAAGG AGACCCTCTC CAAGGAGGAC 
ATGGCCCGCA TCTGCGCGCC GGTCACCAAG CGCCCGTCGC TCGCCCCGTA CAACGGCTTC 
GGCAAGCGCA CCCCGTCGGA CCAGCCGCCG GTGCTGACCC CCGCGGAGCA GGCCGCCCAG 
AACGGGAACG GCCACCTCGG CCACGGCAGC ACCGCTGTGG GGGACGTGGG GGCCCCCGCG 
CAGAGGTGA 

 

Protein sequence

MERKKIFRSV WFWVVLVVLL ALAFSSLFRG TGGFQEVRTA VALEQIQNGN AERVTINDKE 
QTLDLDLANP VEGSDQITAS YPLGAADDVF DLVSGLGNGE GVDFTTNVTQ DSVLVSLLIS 
FLPFVILLLL LFWLFNSMQG GGRGVMAFGK SKAKQVTKDT PKTTFADVAG ADEAIEELHE 
IKDFLANPVK FQAVGAKIPK GVLLFGPPGT GKTLLARAVA GEAGVPFFSI SGSDFVEMFV 
GVGASRVRDL FEQAKQNAPA IIFVDEIDAV GRHRGAGMGG GHDEREQTLN QMLVEMDGFD 
VKGGVIMIAA TNRPDILDPA LLRPGRFDRQ IAVDRPDLEG RKRILEVHAK GKPLAPDVDL 
ETVARRTPGF TGADLANVLN EGALLTARNN GTVITDDLLE EAIDRVVAGP ERKTRAMSEK 
EKKVTAYHEG GHALVAHALP NLDPVHKVTI LPRGRSLGHT LVLPTEDKYT QTRSEMIDTL 
AYALGGRAAE ELVFHEPTTG AGNDIEKATA MARAMVTQYG MSAKLGAVKY GSTDSEPFLG 
RDMGTRPDYS EAVAADIDAE IRALIEAAHD EAWEILVEYR GVLDQLVLEL MEKETLSKED 
MARICAPVTK RPSLAPYNGF GKRTPSDQPP VLTPAEQAAQ NGNGHLGHGS TAVGDVGAPA 
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