| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0602 |
|---|
| Symbol | |
|---|
| ID | 8752257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 640745 |
|---|
| End bp | 643006 |
|---|
| Gene Length | 2262 bp |
|---|
| Protein Length | 753 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | V-type H(+)-translocating pyrophosphatase |
|---|
| Protein accession | YP_003407753 |
|---|
| Protein GI | 284989199 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGACA GTTCCCTCTC CGGCGGTGAC GTCGTCCTCG TGACGATCGT CCTCGCCATC
TCGCTCGCCG CTCTCGCCTT CGCCGCCTAC CTGGTCCGCG CGGTCATGGC CGCCGAGCAG
GGCACCACGA AGATGCGTGA GATCGCGCAG GCGGTGCAGG AGGGTGCCGC GGCGTACCTG
CGACGACAGT TCAGGACCCT CGGGGTCTTC GCGATCATCG TCTTCCTGCT CCTCCTGGTG
CTCCCGGTGG CCGACGGCGG CTGGGGGACC CGCATCGGCC GGGCACTGTT CTTCCTCGTC
GGCGCCCTGT TCTCGGCGGC GGTCGGCTTC ATCGGCATGA CCCTGGCGAC CCGCGGCAAC
GTCCGGGTCG CCGCGGCGGC CCGCGGCGGC GGGTATCAGC CCTCCTTCCG CATCGCCTAC
CGGACCGGCG GTGTCGTCGG GATGATCACC ATCGGCCTGG GCCTCTTCGG TTCGGCGCTG
GCGCTGCTGC TCTTCGACGA GACCGCGCCC ATCGTCCTCG AGGGCTTCGG CTTCGGCGGC
GCGCTGCTGG CGATGTTCAT GCGTGTCGGC GGCGGCATCT TCACCAAGGC CGCCGACGTC
GGCGCCGACC TGGTCGGCAA GGTCGAGGCC GGCATCCCCG AGGACGACCC GCGCAACGCG
GCAACGATCG CCGACAACGT GGGTGACAAC GTCGGCGACT GCGCCGGCAT GGCCGCCGAC
CTGTTCGAGT CCTACGCCGT CACCCTGGTC GCCGCGCTCA TCCTCGGCCA GGTCTTCTTC
GGCAACGTGG GCATGGTGTT CCCCCTGCTG GTCGCGGCCA TCGGCGTGAT CGCCTCGGTC
GTCGGTGTGC TCGCCACCAG GCCGGGCAAG AGCGACGCCA GCGGGATGGT CCCGATCAAC
CGCGGCTTCT TCGCCTCGGC CGCGGTCTCC CTCGTACTGG TCGCTGCGGC GTCCTTCACC
TACCTGCCCA GCATCGCCGA CGTGGCCGAC CTGTCGGTCA GCCCGCAGGT GGTCGGATTC
GTGTCGGTCC TCATCGGCGT CGTGCTGGCG GCGACGATCC AGCAGCTCAC CGGCTACTTC
ACCGAGACCA GCCGCAAGCC GGTCAAGGAC ATCGGCCGCA GCTCTCTGAC CGGCCCGGCC
ACCGTGATCC TCTCGGGGAT CTCCCTCGGC CTCGAGTCCG CCGTCTACGC GGCGCTGCTC
ATCGGTGGCG CCGTCTACGG CGCCTTCCTG ATCGGCGGCG GCGCCGCCCT CTACGCCGTC
GCGCTCGCAG GCTGCGGCCT GCTCACCACC GCAGGCGTCA TCGTCGCGAT GGACACCTTC
GGTCCGGTGA GCGACAACGC CCAGGGCATC GCCGAGATGT CCGGCGACAT CGACGAGGAC
GGCGCCCGGG TGCTCACCGA CCTCGACGCC GTCGGCAACA CGACGAAGGC CATCACCAAG
GGCATCGCCA TCGCGACGGC GGTGCTGGCC GCGACAGCGC TCTTCGGGTC CTACAACGCC
CAGGTCGGAG TGGCGCTCGA CGAGGCCGGC GCGACCCTCG GCGGCGCCTT CAGCCTGGTG
AACCCGAACA ACGTCGTCGG GGCGGTGCTC GGCGCAGCGG TGGTCTTCTT CTTCTCGGGC
CTGGCCATCA GCGCCGTGTC GCGGGCGGCG GGCCGGGTGG TCTTCGAGGT CCGTGAGCAG
TTCCGCACGC GGCCGGGGAT CATGGACTAC AGCGAGCGGC CGGACTACAG CCGTGTCGTC
GACATCTGCA CCAAGGACTC GTTGCGCGAG CTGGCCACCC CGGGGCTGTT GGCAGTGCTG
GCCCCGGTCG CCGTGGGCTT CGGTCTGGGC ATCGGCCCTC TGGCGGCCTA CCTCGTGGGC
GCGATCGCGG CCGGCACGCT GATGGCGGTC TTCCTCGCCA ACTCCGGTGG CGCGTGGGAC
AACGCGAAGA AGATGGTCGA GGACGGCGCG TACGGCGGCA AGGGCAGCGA GGCGCACGCC
GCCACCGTCA TCGGCGACAC CGTGGGCGAC CCGTTCAAGG ACACCGCCGG CCCGGCGATC
AACCCGCTGA TCAAGGTGAT GAACCTCGTG GCTCTCATCA TCGCTCCCGC CGTCGTCACG
ATGTCGGTCG GCGAGGACGC CAGTACCGGT CTGCGCGTCG CCATCGCGCT CGGTGCCGTG
CTGGTGATCG TGGTCGCGGT CGTGGTGTCC AAGCGCCGCT CGGTGGTCGT CGGCGACTCC
TCCTCCGACA CCTCGACCTC GCTGACCACC AGCGTCCCCT GA
|
|---|
| Protein sequence | MPDSSLSGGD VVLVTIVLAI SLAALAFAAY LVRAVMAAEQ GTTKMREIAQ AVQEGAAAYL
RRQFRTLGVF AIIVFLLLLV LPVADGGWGT RIGRALFFLV GALFSAAVGF IGMTLATRGN
VRVAAAARGG GYQPSFRIAY RTGGVVGMIT IGLGLFGSAL ALLLFDETAP IVLEGFGFGG
ALLAMFMRVG GGIFTKAADV GADLVGKVEA GIPEDDPRNA ATIADNVGDN VGDCAGMAAD
LFESYAVTLV AALILGQVFF GNVGMVFPLL VAAIGVIASV VGVLATRPGK SDASGMVPIN
RGFFASAAVS LVLVAAASFT YLPSIADVAD LSVSPQVVGF VSVLIGVVLA ATIQQLTGYF
TETSRKPVKD IGRSSLTGPA TVILSGISLG LESAVYAALL IGGAVYGAFL IGGGAALYAV
ALAGCGLLTT AGVIVAMDTF GPVSDNAQGI AEMSGDIDED GARVLTDLDA VGNTTKAITK
GIAIATAVLA ATALFGSYNA QVGVALDEAG ATLGGAFSLV NPNNVVGAVL GAAVVFFFSG
LAISAVSRAA GRVVFEVREQ FRTRPGIMDY SERPDYSRVV DICTKDSLRE LATPGLLAVL
APVAVGFGLG IGPLAAYLVG AIAAGTLMAV FLANSGGAWD NAKKMVEDGA YGGKGSEAHA
ATVIGDTVGD PFKDTAGPAI NPLIKVMNLV ALIIAPAVVT MSVGEDASTG LRVAIALGAV
LVIVVAVVVS KRRSVVVGDS SSDTSTSLTT SVP
|
|---|
| |