Gene Gobs_0594 details

Gene Information

• Locus tag: Gobs_0594
• ID: 8752249
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 634152
• End bp: 634865
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 81%
• Product: Type II secretion system F domain protein
• Protein accession: YP_003407746
• Protein GI: 284989192

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTCGCGC TCGTGCTGGC GAGTGCCCTG CTGTGCTGGC CGGTGCGGTC GCCGGTCGCC 
GTCCGCGCCC GGTGGCTGGC CGCCCGGGAC GGTGCAGGGC GCCCGCCGCA GCCCTCCGGT 
CCGGGCGCTG TGCGGCGGCG GTGGCTGCTG GCGGGCGCGA CCGGCCTGGC CGCCGGGCTG 
CTGGTCGGCG GGGGTGCCGG GGTGGGAGTG GCCGGGCTCG TCGCGGTCGG CGGTGAACGG 
CTGCTGCGCC GCGGCAGCCG GGAGGGCGCG CGGGCCGGCC CGACACCCGA GGCGGACCTG 
CCCGTCGCCT GCGACCTGCT CGCGGTCTGC CTCGAGGCGG GCCTGCCCGT GGGTGGTGCG 
CTGGCCGCGG TGGCCGCCGC CCTGGCGGGT CCCCTCGGCC CCGAGCTGAC CACGGTGGCC 
GGCCTCTACC GGCTGGGCGC GGCGCCGCGG CGGGCGTGGG CCGACGTGCC CGCCGAGCTG 
GCCGTCCTCG GCCGGGTCCT GGTGCGGGCG GGGGAGTCCG GCTCGACCGT CGTCCCGGCG 
CTGCGGTCGC TGGCCGGCGA CGCCCGCGCC GAGCAGCGCA GCCGCGCCGA CGCCGCCGTC 
CGGCGTGCCG GGGTCTGGGT GCTGGCGCCG CTGGGGGTCT GCTTCCTGCC GGCCTTCCTC 
TGCCTGGGCG TGGTGCCGCT GGTGCTCGGC ATCGCGGCCG ACGTCTTCGG CTGA 

 

Protein sequence

MVALVLASAL LCWPVRSPVA VRARWLAARD GAGRPPQPSG PGAVRRRWLL AGATGLAAGL 
LVGGGAGVGV AGLVAVGGER LLRRGSREGA RAGPTPEADL PVACDLLAVC LEAGLPVGGA 
LAAVAAALAG PLGPELTTVA GLYRLGAAPR RAWADVPAEL AVLGRVLVRA GESGSTVVPA 
LRSLAGDARA EQRSRADAAV RRAGVWVLAP LGVCFLPAFL CLGVVPLVLG IAADVFG