| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0573 |
|---|
| Symbol | |
|---|
| ID | 8752228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 613689 |
|---|
| End bp | 614858 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
|---|
| Protein accession | YP_003407725 |
|---|
| Protein GI | 284989171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCA CCAGGGACTG GTTCGAGACC GTCGAGGAGG CCCAGCACCG CGCGAGGAAG
CGGCTGCCGC GGTCGGTGTA CCTGGCGCTC GTCGCCGGGA CCGAGAAGGG GCTGACGGCC
GGCGACAACG TCGCCGCCTT CGACGAGATC ACCTGGCGGC CGCACGTCGC CGACCTGCAC
GCCAAGCGGG AGACGGCCAC CACCGTGATG GGCCAGGAGG TGTCCATGCC GGTGCTGGTC
TCCCCCACCG GCGTACAGGC GGTGCACCCG GACGGCGAGG TGGCGGTGGC CCGCGCGGCC
GCGGCCGAGG ACGTCGCGAT GGGGCTGTCC TCGTTCGCCA GCAAGCCGGT GGAGGAGGTC
GGCGCGGCGC ACTCCAAGCT GTTCTTCCAG ATGTACTGGG TCGGCTCGCG GGAGACGATC
CTCGCCCGGG CCGACCGGGC CCGCGCCGCC GGCGCCAAGG GCCTGATCAT GACGCTGGAC
TGGTCCTTCG CCTCCCGCCG CGACTGGGGC AGCCCACCCA TCCCGGACAA GATCGACCTG
AAGAACGCGG TCAAGTTCGC CCCCGAGGTG CTGCGCAAGC CGCGCTGGCT GGCCACCTAC
CTCCGCTCGG GCGGCATCCC CGAGCTCAGC GTCCCCAACC TGGCGCTCGG CGGCGAGGAG
CCCCCGAACT TCTTCGGCGC CTACGGCCAG TGGATGGGCA CTCCGCTGCC CACCTGGGAG
GACGTCGCCT GGCTGCGCCA GCAGTGGGGC GGGCCGTTCA TGCTCAAGGG GATCACCCGG
CCCGACGACG CCCGCCGTGC CGTCGACGCC GGCGTCAGCG CCATCTCCGT CTCCACCCAC
GGCGGCAACA ACCTCGACGG CACGCCGGGG GCGATCCGCT CGCTGCCCGG GGTGGTCGAC
GCGGTCGGCG ACCAGGTCGA GGTCGTCATG GACGGCGGGG TGCGCCGCGG CTCCGACGTG
GTCAAGGCGA TGGCCCTGGG CGCCAGGGCC GTGATGATCG GCCGGGCCTA CCTGTGGGGC
ATGGCCGCCA GCGGCGAGCG GGGCGTGCAG AACGTCCTGT CGATCCTCCG GCAGGGCATC
GACGAGGCGC TGCTCGGGCT CGGGAAGGCC TCGGTGCACG ACCTGACCCG CGAGGACGTC
GTCCTGCCGC CGCACTTCAC CCGCGACTGA
|
|---|
| Protein sequence | MASTRDWFET VEEAQHRARK RLPRSVYLAL VAGTEKGLTA GDNVAAFDEI TWRPHVADLH
AKRETATTVM GQEVSMPVLV SPTGVQAVHP DGEVAVARAA AAEDVAMGLS SFASKPVEEV
GAAHSKLFFQ MYWVGSRETI LARADRARAA GAKGLIMTLD WSFASRRDWG SPPIPDKIDL
KNAVKFAPEV LRKPRWLATY LRSGGIPELS VPNLALGGEE PPNFFGAYGQ WMGTPLPTWE
DVAWLRQQWG GPFMLKGITR PDDARRAVDA GVSAISVSTH GGNNLDGTPG AIRSLPGVVD
AVGDQVEVVM DGGVRRGSDV VKAMALGARA VMIGRAYLWG MAASGERGVQ NVLSILRQGI
DEALLGLGKA SVHDLTREDV VLPPHFTRD
|
|---|
| |