| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0508 |
|---|
| Symbol | |
|---|
| ID | 8752162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 558549 |
|---|
| End bp | 559904 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | YP_003407661 |
|---|
| Protein GI | 284989107 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGT GGTTGCTCCT CCTCGCCGCC GTGGCGCTCA CGGCACTGAC CGGTTTCTTC
GTGGCCGCCG AGTTCTCCCT GACCACGGTC GACCGCGGGC GGGCCGAGCA GGCCGCGGCG
TCCGGGGACC GCGGGGCCCG GGGTGTCGTC GCGGCGCTGC GCACGCTGTC CACCCAGCTC
TCGGCCGCCC AGCTGGGCAT CACGATCACC ACGCTGGTCG TCGGCTACCT GGCCGAGCCC
GCGCTGGGCC AGCTGCTGCG CGGCCCCCTG GAGGCGGCCG GGCTGCCCGC CGGCTGGGTC
ACCGGCGTCT CCTACGGTCT GGCGCTGGCG CTGGCCACCA CGCTGCAGAT GCTGATCGGC
GAGCTCGGTC CCAAGAACCT GGCCATCGCC CGCCCGCTGC CCGTCGCTGC CGCGGTGGCC
CCAGGGATGC GCGCCTTCAC CCGGGTCACC GGCGTCGTCG TGCACGCCCT CCAGGCCCTG
GCCAACGCGA TCGTCCGGCG CCTGGGCTTC GAGCCGCGCG AGGAGCTGGA GTCCGCGCGC
GGCGCCGACG AGCTGGCCGC GGTGGCCCGC CGCTCGGCCG AGGAGGGTGA CCTCTCGCCG
CGCGCGGCCC GGCTGCTGGA GCGCTCCCTC GCGCTGCGCG ACAAGGTCGC CGCCGACGTG
ATGACCCCGC GCACCCAGAT GTGGGCGCTG CGCGCGGACG CCACCGCGGC CGACGTCATC
GGCGCGGCGG TCGCCTCGGG TTCGTCCCGC TTCCCGCTCT ACGGCGCCGG CCTCGACGAG
GTCACCGGGG TCGTGCACGT CAAGCACGCG GTCGCCGTCC CGGAGGACCA GCGGGGCGTC
GTGCCGGCCG AGGAGCTCGC GGTGCCGATC CTCACCGCGC CCTCGCTGCT GCGGGTGGAG
CGGCTGCTGG ACCTCCTGCG CGAGGAGGGC CTGCAGATGG CCCTGGTGGT GGACGAGTGG
GGCGCGACGC ACGGCATCGT GACGCTGGAG GACATCGTGG AGGAGGTCGT CGGCGAGATC
GCCGACGAGA CCGACCGCCC GCTGCGGCTG CTGCGCCGGG TGGATCCGCA GACCTGGCTG
CTGTCCGGGC TGCTGCGGCC CGACGAGGTG CGGGAGCGCA CCGGCGTCCC GGTGCCCGAG
GGCCGCTACG AGACGCTCGG CGGCTACCTC GCCGAGCAGC TGCAGCGCCT GCCCGCCGTG
GGTGACACGG TGCCCGTCGA GGGCGGGGAG CTGACCGTGG AGACGATCGA GGGACGGCGG
GTGGCCCGGG TGCGGGCGCT GATGCGGGAC GGCTACGCCT CGGGGGCGAC CGCCGTCCGG
CTCGTCGAGG ACGACGAGAA GGAGCCGGCC GCGTGA
|
|---|
| Protein sequence | MTEWLLLLAA VALTALTGFF VAAEFSLTTV DRGRAEQAAA SGDRGARGVV AALRTLSTQL
SAAQLGITIT TLVVGYLAEP ALGQLLRGPL EAAGLPAGWV TGVSYGLALA LATTLQMLIG
ELGPKNLAIA RPLPVAAAVA PGMRAFTRVT GVVVHALQAL ANAIVRRLGF EPREELESAR
GADELAAVAR RSAEEGDLSP RAARLLERSL ALRDKVAADV MTPRTQMWAL RADATAADVI
GAAVASGSSR FPLYGAGLDE VTGVVHVKHA VAVPEDQRGV VPAEELAVPI LTAPSLLRVE
RLLDLLREEG LQMALVVDEW GATHGIVTLE DIVEEVVGEI ADETDRPLRL LRRVDPQTWL
LSGLLRPDEV RERTGVPVPE GRYETLGGYL AEQLQRLPAV GDTVPVEGGE LTVETIEGRR
VARVRALMRD GYASGATAVR LVEDDEKEPA A
|
|---|
| |