| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0494 |
|---|
| Symbol | |
|---|
| ID | 8752148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 541648 |
|---|
| End bp | 544524 |
|---|
| Gene Length | 2877 bp |
|---|
| Protein Length | 958 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003407647 |
|---|
| Protein GI | 284989093 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCC TGCTGCTCCT CCACCTGTTC GCCAGCGTGC TGGCGCCCGT GCTCGTGCGG
TGGTGGGGGC GGCAGGCCTT CCTCGCCCTC GCACTGGTGC CCGCCGCCGG CTTCGCCTGG
GTGCTGTCCC GGCTCGGCCC GGTCCTCGCC GGCCAGGAGC CGCGCGAGAC GCTGCCGTGG
ATCCCCGCCC TCCAGCTCGA CGTCGCCCTG CGGCTCGACG CCCTGGCGCT CACCTTCGCC
GCGCTGGTCA CCGGCGTCGG CGCGCTGGTG CTGGTCTACT GCGCCCGCTA CTTCTCCCCG
GGCGAGGAGG GCACCGGCCG CTTCGCCGGC TCCCTCACCG CCTTCGCCGG CTCCATGCTC
GGCCTCGTCC TCGCCGACGA CATGCTGCTG CTCTACGTCT TCTGGGAGCT CACGACCGTC
TTCTCCTTCC TCCTGATCGG GGGCTCGGGG CGGCGGCTGG CCGCGCGCCG GGCGGCGTCG
CAGGCGCTCA TCCTGACGAC CGCCGGCGGC CTCGCGATGC TGGTCGGGCT CATCCTCATC
GGCCGGGCCA GCGGCTCCTT CCTGCTCTCC GAGGTCGTCG CCGAGCCCGG CAGCGGCACC
GGGGTGACCG TCGGCGTGGC CCTGGTGCTC GCCGGGGCGG TCACCAAGTC CGCCCTCGTG
CCGTTCCACT TCTGGCTGCC CGCGGCCATG GAGGCGCCGA CGCCGGTCAG CGCCTACCTG
CACGCCGCGG CGATGGTGAA GGCCGGCGTC TACCTGGTCG CCCGGCTGGC ACCGGGCTTC
GCCGACGTCC CCGGATGGCG GCCGGTCGTG CTCGGCCTGG GCGTGGCGAC CATGCTGGTC
GGCGGGTACC GCGCCCTGCG CCAGAAGGAC CTCAAGCTGC TGCTGGCCTT CGGCACGGTC
AGCCAGCTGG GCTTCCTCGT GACGCTCGTG GGCGCGGGCA GCTCGGAGCT GGCCGCGGCC
GGCCTGGCCA TGACGCTGGC GCACGCGCTG TTCAAGTCCA CCCTCTTCCT GACCGTCGGC
GTCGTCGACC ACGCGACCGG CACCCGCGAC CTGCGCCGGC TGTCCGGCCT CGGCCGGCGG
CTGCCGCTGC TCGCCGCCAT CGGCGCCGCC GCCGCGGCCT CCATGGCCGG GTTGCCGCCG
CTGCTGGGCT TCGTCGGCAA GGAGGCCGCG TTCACCGCCC TGCTGGACGG CGGGGTGCCC
GACCGCACCG TCGCGCTCGT CGTCCTCACC GGCGTGGTCG CGGGCTCGGT GCTCACCGCG
GCCTACACCG CGCGCTTCGT GTGGGGCGCC TTCGCCCGCA AGCCCGGCGT CGAGGACAGC
GAGCTCGAGC ACCCGCCGGA GCCGCTGTTC CTCGCCGCCC CCGCCGTCCT GGCGCTGACC
GGGCTGGTCC TCGGGCCGGC CAGCCCGCTG CTGGACCCGC TGGTCGTCGC CTACGCCGAG
ACGCTGCCGC TGCTGGCCCC CGAGGCCGAG CACCTGGCGC TGTGGCACGG CTGGCAGCCC
GCGCTGGCGC TGTCGGCGCT GACCGTCGCC GGCGGTGCCG CGCTGTTCGC CGTCCGCGGG
CCGGTCCAGC GCCTGCAGCG GCGGGTGGCC GTCGGCGCCT CGGCCGACGA GGGCTACTGG
AACGTGGTCC AGGGGATCGA CCGGCTCTCG GTGCTGGTCA CCGGCACCAC CCAGCGCGGG
TCGCTGCCGG CCTACCTCGG CACGATCCTG GTCGTCGTGC TGGCGCTGCC CGGCACGCTG
CTGCTCACCC GCGCCCCGTG GCCCGGCGAG TGGCGGGCCT GGGACACCCC GGTGCAGGCG
GTGGTCGGCG TCGTCGTCGT GACCGCTGCC GCGCTCACCC TGCGGATCCG CCAGCGGCTG
TCGGCGGTGC TGGTCGTCGG CGTCACCGGC TACGGCATCG CCGTCGTCTT CGCGCTGCAG
GGCGCCCCCG ACCTCGCGCT CACCCAGTTC CTCGTCGAGA CGCTCACCCT CGTGGTCTTC
GTGCTGGTGC TGCGCAAGCT GCCCAAGGAC ATCTCCGAGC GGCACCGGCC GCGCGAGCGC
GCCGTCCGCG GGGTCATCGC CGTCGCGGTG GGCGCGTTCA TGGCCGCCGC GGGCGCGGTG
GCGCTGTCCG CCCGCACCGC GACGCCGGTG TCAGCGGGCT GGCCGGGGCC CGCCTACGAC
TTCGGCGGCG GCAAGAACGT CGTCAACGTG ACCCTGGTCG ACATCCGCGC CTGGGACACC
CTCGGCGAGA TCTCGCTGCT GGTCGTCGCC GCCACCGGCG TGGCCAGCCT CGTCTTCCTC
CGGGGACGCA CCGGCGGCGT CGACCGGGTG ACCCGGGCGG ACCTGGCCCA GCGGCGCGAG
CGCGGCCGGC GGGCCCCGCG GGACCGCTGG CTGGCCGCCA CCGCGACGCT CGACCCGGCC
CGGCGCTCGG TCGTGCTCGA GGTCGTCACC CGGCTGCTGT TCCACACGAT CATGGTGTTC
TCGCTGTACC TGCTGTTCTC CGGGCACAAC GAGCCCGGTG GCGGGTTCGC CGGCGGCCTG
GTCGCCGGCC TGGCGCTGGT GCTGCGCTAC CTGGCCGGTG GGCGCTACGA GCTCGGCGAG
GCCGCGCCGG TCGCGCCGGG CCTGCTGCTC GGCGGCGGGC TGCTCTTCGC GGGCGGCACC
GGCGTGGCCG GCCTGCTGCT GGGCGCCGGG GTGCTGCAGA CGGCGATCCT GCAGACCACG
CTGCCGGTGC TCGGCGACGT CAAGCTCGTG ACCTCGCTCT TCTTCGACAT CGGCGTCTAC
CTGATCGTCG TCGGGCTGAT CCTCGACGTG CTGCGCAGCC TGGGCGCGGA GCTCGACCGC
CAGGAGGACC AGGAGGACGA GATCGAGCTC GCCCCGGGAG AGGTGGTGCT GCGATGA
|
|---|
| Protein sequence | MLVLLLLHLF ASVLAPVLVR WWGRQAFLAL ALVPAAGFAW VLSRLGPVLA GQEPRETLPW
IPALQLDVAL RLDALALTFA ALVTGVGALV LVYCARYFSP GEEGTGRFAG SLTAFAGSML
GLVLADDMLL LYVFWELTTV FSFLLIGGSG RRLAARRAAS QALILTTAGG LAMLVGLILI
GRASGSFLLS EVVAEPGSGT GVTVGVALVL AGAVTKSALV PFHFWLPAAM EAPTPVSAYL
HAAAMVKAGV YLVARLAPGF ADVPGWRPVV LGLGVATMLV GGYRALRQKD LKLLLAFGTV
SQLGFLVTLV GAGSSELAAA GLAMTLAHAL FKSTLFLTVG VVDHATGTRD LRRLSGLGRR
LPLLAAIGAA AAASMAGLPP LLGFVGKEAA FTALLDGGVP DRTVALVVLT GVVAGSVLTA
AYTARFVWGA FARKPGVEDS ELEHPPEPLF LAAPAVLALT GLVLGPASPL LDPLVVAYAE
TLPLLAPEAE HLALWHGWQP ALALSALTVA GGAALFAVRG PVQRLQRRVA VGASADEGYW
NVVQGIDRLS VLVTGTTQRG SLPAYLGTIL VVVLALPGTL LLTRAPWPGE WRAWDTPVQA
VVGVVVVTAA ALTLRIRQRL SAVLVVGVTG YGIAVVFALQ GAPDLALTQF LVETLTLVVF
VLVLRKLPKD ISERHRPRER AVRGVIAVAV GAFMAAAGAV ALSARTATPV SAGWPGPAYD
FGGGKNVVNV TLVDIRAWDT LGEISLLVVA ATGVASLVFL RGRTGGVDRV TRADLAQRRE
RGRRAPRDRW LAATATLDPA RRSVVLEVVT RLLFHTIMVF SLYLLFSGHN EPGGGFAGGL
VAGLALVLRY LAGGRYELGE AAPVAPGLLL GGGLLFAGGT GVAGLLLGAG VLQTAILQTT
LPVLGDVKLV TSLFFDIGVY LIVVGLILDV LRSLGAELDR QEDQEDEIEL APGEVVLR
|
|---|
| |