| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0443 |
|---|
| Symbol | |
|---|
| ID | 8752093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 486585 |
|---|
| End bp | 489551 |
|---|
| Gene Length | 2967 bp |
|---|
| Protein Length | 988 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | acetoacetyl-CoA synthase |
|---|
| Protein accession | YP_003407596 |
|---|
| Protein GI | 284989042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.303442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGACT TCCGTGACCG CGCAGAGGTC GCGGCGGGTC GCGACCTCGG GAACGCGGTG
GCGCTCCACG AGTGGTCGGT GCAGGAGTTC CGCGACTTCT GGCGGCTGTT CCTCGACTGG
GCCGGGCCGG CGTGGGAGGG CTCGGCGGAC CCGGTCTGCA CCGGCGACGA CGTCGAGACG
GCGGTCTTCT TCCCCGCCGT CTCCCTCAAC TACGCCGAGA ACCTGCTCCG TCCCCTGCCG
GGCGTCGACG ACGGCGCCGT CTGCCTCACC TCCGTGCACG GCGACGGCAG CCGCGACCGC
TGGACCCGCG CGGAGCTGCG CGAGGACGTC GACCGGACGG CGACCGCGCT CGCGCGCCTG
GGAGTCGGCG CCGGCGACCG CGTCGTGGTG GTCGCGGCCA ACAACGGCCA CGCGGTCGTC
GCCGCGCTGG CCACCGCGGC GCTCGGCGCC ACCCTCTCCT CCGGCATGCC CGACATGGGG
CCGGCCGCAC TGCTGGGCCG GTTCACCCAG GTGGAGCCGG CGCTCATGGC ACTCGACCGC
ACCGGCGCCA CCGGCTGGGA CGGCACCGAC GGCGACCTGC TCGACCAGGT GGTGGCCGGG
CTGCCGACGG TGCGCACCGT CGTCGTCCTC GACGTCCTCC CGTTGCCGTC GCTGCGCGGG
GTGCGCGTGG TGCGGCTGGC CGACCTGCTG TCGGACCTCG GCCCGGACAC CCCGCGCACG
CCGTGGCCCC GGATGCCGTT CAACGACCCG CTGTTCGTGA TGTTCTCGTC GGGCACGACG
GGGCCGCCGA AGGCGATGGT GCACGGCATC GGCGGGACGC TGCTGGAGCA CCTCAAGGAA
CACCGGCTGC ACGGCGACCT GGACGCCCGC GACACGCTGT ACTTCCAGAC CACCACCGCC
TGGATGATGT GGAACTGGCA GCTGTCCGCG CTGGCGGTGG GCGCCGGCAT CGTCCTCTAC
GACGGTCCGG TGCCCGGCCC GGAGACGCTC TGGCGACTGG CGGCGGAGGA GCGGGTGACC
GTCTTCGGCA CGAGCCCGGC CCACCAGCAG CTGTCGCAGG ACACCGGGCT GCGCCCGGCC
GAGGTGTTCG ACCTGAGCGC GCTGCGTGCG GTCATGTCCA CCGGTTCGGT GCTGCACGAC
TGGCAGTTCG ACTGGTTCGC CGCAGCGGTC GGTCCGCAGC CGCTGCAGTC GATCAGCGGT
GGCACCGACA TCATCGGCTG CTTCGTGCTC GGCCACCCCG AGCTGCCGGT GGTGCGGGGC
CGCAGTCAGG CGCTCAGCCT CGGCCTGGAC GTCGCCGCGC TCGACGCCGG GGGTCACGCG
GTCGTCGGGC CGCCGGGCGA GCTGGTCTGC CGCCGTCCGT TCCCGTCCCG CCCGGTGCGC
TTCCTGCGCG ATCCCGACGG CTCCCGGCTG CACGGTGCCT ACTACACCGA GCACCCGGGG
GTGTGGACCC ACGGCGACGT CGTCGACCTC GCCCCGGACG GCACCGCCCG CGTGCACGGC
CGCTCGGACG GCGTCCTCAA CATCGACGGC ATCCGCATCG GGCCGGCCGA GATCTACCGC
ATCCTCAAGG GCCTGCCGGA GATCGCCCAG GCGGTCGCGG TGGAACAGCG GCACCCGACC
ACGCCCGGCG CCACCCGGCT GGTGCTGCTG GTGCAGCTGC ACGGCGGCGC CGTCCTCGAC
GGGGAGCTCG AGCGCCGCAT CCGGACGACG CTGCGCAGCC AGGCGACCGC CGCGCACGTG
CCCGCACTGG TGCTGGCCGT CCCCGAGGTG CCGCTGACGC ACAGCGGGAA GGTCTCGGAG
AAGGCGGCCC GCGACACCGT CAACGGCGAC CGGGTGGTCA ACGTCGACGC GCTGCGCAAC
CCCGGCTCGC TGGCGGGCAT CACTGCTGCC CTGCGGACCG CCACCGAGCG CACCGCGCTG
CCGGTCCCGG AGCCGCGGTC GGGATCCGGC CGGCCGCCCG CCGCGCCACG ACCCGCAGTC
CCGCCCGGCG ACACGGCCGC GGTCACGGCG GTGGTCTCCA CGATCTGGCG CGACCTCGGC
GTGGTGCCGC ACGCCGGCAT CACGGACTTC TTCGACCTCG GCGGCACCTC CCGCCAGTCC
ATGACGCTGC TGCGACGGCT CCAACTGGAG CTCGACGCCG ACGTCACCAT GGAGCAGTTC
CTCGCCGACC CGACGATCCC CGGCCTGGCC GCGGCGGTCG CGGCGGCGGC GGACGCCACG
GCCGTGCTGC TGCTGGCGGC GGGCAACCCG GCGGCGCCCC CGCTGTTCCT GCTCAACGAT
GCGTGGGGCG GCGTCGAGGT GTACCGGACG CTGGCCGAGC TGCTGGTCGG GGTCGGGCCG
GTGTACGGCG TCCGCGCCGA CCTCGTGCAC CCCGACGGCA GCCGCAAGCC GATCGACGAC
CTGGCCGACG AGCACGCCGC GACCATCGTC GCGGCGCGGC CGGAGGGCCC GCTACGACTG
GCCGGCTTCT CCTTCGGCGG GCTGGTCGCG TTCGAGACGG CCCGGCGGCT GAGGGCGGCC
GGACGGGAGG TCGAGTTCCT GGGCCTGCTC GACCCGCTGC CGCCGGAGGA CAGCCTCCCC
CCCGTGCGCC GCCGCCTGCA CCGCCTCACC GGCGAGATCG GCGCGCTGAT CCCCGGGCTG
GCGGACCGGC CGCTGCGCGA CGTGGTCCGC CAGCGGCTGC GGCCGGAGAC CCGGCCGGCC
GACCAGCAGG CGCTGGACCG CTCCGGGGCG GTCTACGCCC GGCACCGGCT GCAGCACTAT
GACGGGCGGG CGACGTACTT CCGGGCGCGC CGGCGCATCC CGGTGTCCGG GCACTTCATG
TCGGCGTGGC GGGCCGCCGC ACCGCGACTG GAGGTCGTCT CCGTCCCGGG CCCGCACCAC
GACCTGCTGG CCGGGCGGCA CGTCGTCGCG CTGGCGGTGC AGATGTCACT GGCGCTCCGG
ACGGCGGCGC AGCTGCGCCG GTCCTGA
|
|---|
| Protein sequence | MADFRDRAEV AAGRDLGNAV ALHEWSVQEF RDFWRLFLDW AGPAWEGSAD PVCTGDDVET
AVFFPAVSLN YAENLLRPLP GVDDGAVCLT SVHGDGSRDR WTRAELREDV DRTATALARL
GVGAGDRVVV VAANNGHAVV AALATAALGA TLSSGMPDMG PAALLGRFTQ VEPALMALDR
TGATGWDGTD GDLLDQVVAG LPTVRTVVVL DVLPLPSLRG VRVVRLADLL SDLGPDTPRT
PWPRMPFNDP LFVMFSSGTT GPPKAMVHGI GGTLLEHLKE HRLHGDLDAR DTLYFQTTTA
WMMWNWQLSA LAVGAGIVLY DGPVPGPETL WRLAAEERVT VFGTSPAHQQ LSQDTGLRPA
EVFDLSALRA VMSTGSVLHD WQFDWFAAAV GPQPLQSISG GTDIIGCFVL GHPELPVVRG
RSQALSLGLD VAALDAGGHA VVGPPGELVC RRPFPSRPVR FLRDPDGSRL HGAYYTEHPG
VWTHGDVVDL APDGTARVHG RSDGVLNIDG IRIGPAEIYR ILKGLPEIAQ AVAVEQRHPT
TPGATRLVLL VQLHGGAVLD GELERRIRTT LRSQATAAHV PALVLAVPEV PLTHSGKVSE
KAARDTVNGD RVVNVDALRN PGSLAGITAA LRTATERTAL PVPEPRSGSG RPPAAPRPAV
PPGDTAAVTA VVSTIWRDLG VVPHAGITDF FDLGGTSRQS MTLLRRLQLE LDADVTMEQF
LADPTIPGLA AAVAAAADAT AVLLLAAGNP AAPPLFLLND AWGGVEVYRT LAELLVGVGP
VYGVRADLVH PDGSRKPIDD LADEHAATIV AARPEGPLRL AGFSFGGLVA FETARRLRAA
GREVEFLGLL DPLPPEDSLP PVRRRLHRLT GEIGALIPGL ADRPLRDVVR QRLRPETRPA
DQQALDRSGA VYARHRLQHY DGRATYFRAR RRIPVSGHFM SAWRAAAPRL EVVSVPGPHH
DLLAGRHVVA LAVQMSLALR TAAQLRRS
|
|---|
| |