Gene Gobs_0392 details

Gene Information

• Locus tag: Gobs_0392
• ID: 8752042
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 422549
• End bp: 424624
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 73%
• Product: glycoside hydrolase family 16
• Protein accession: YP_003407549
• Protein GI: 284988995

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGTCGA GGAAACGCCT CCTCGTCCTG TCCGCAGTGG TTGTCGCCGC CTTCGTGGTC 
GCCGTGGTGG TCGTCGTCCT CCGCACGCCC GCCGCGCCGA GCGTCACTGC ATCGTCGGGC 
ACCGACCCCG CCGACCTGGT CGGCAACGAG GATCGCGACG TCGGCTGGCG CACCGATGAG 
GAGACAGTCG GCGCCTGGGT CGAGCTTGCC TATCCCGAGC CGACGGCCGT GGACCGCGTC 
CAGCTGCTCG GCCCCGGCGG TGGGGACACC GGTGCCACCA GCGCCCTCCT GACCTTCGAC 
GGCGGCGGGG AGCTCCTCGT GACGACGGAC GACGCGGGCG ACGCATCCGT CGACTTCCCT 
GAGCGAACCG TGTCCTGGGT GCGGGTCACC GTCGCCGGGG TGCCCGACGG GGCGACGTCG 
GTGGCGCTGG CCGGTCTCAC CGTCGACGGA TCGGCGGACG ACCCGCCGCG GCGGGGGAGC 
CGAGGACCGG TGACCGCGGA GACCTCCAGC GAGGGCAGCG CTCCGGCGGC GGCTCTGTCG 
GATGGCACCC CGGCCGAGGG TGACACCGGG GACGAGTGGA CGCCCGCGGA CGGTGACGAC 
CGGCCGTGGG CCCGGCTGAC GTGGGACACA CCTCGGGAGG TGGCCAGCGT GCAGGTCTTC 
GGGCCGTCGT CGGCCGGCGA CGACGCGGAC GTGCCGTTGA GTGGCGTCCT GCGGTTCGAC 
GACGGCAGTT CCGTCCGGGT CTCTGCAATC GCGTCCGGAG GGCACGAGGG GACCACCATC 
GCCTTCGCCC CGCGGATGGC CACCGCGGTA CGGCTGGAGC TCGACGCGGC GGCGGGACTG 
CGCGAGTTCG CGGTGTACGA CGCAGGCACG ACCCCACCGC GCTGGCCGCA GGACGGCGAC 
ACGTACGCCG TGTCACCGCA GCCCGCGGGG ACGTGTGAGG CGTCGTCGGA TCCCTTCGTC 
CAGCCGGAGC CCGGCCGGCT GACCCTCGTC TGCCCCTCCC CGGGCTCTGT GGTGGACGGC 
CGGACCGACG TCGTCGTGGC GGCCGACCCC GGGACGGCCG TCGAGGCCCG CGTGTGGACC 
GGGGGACCGG CCACCGGGAC GAACGCGGTC GACGTCGTGG CGACAGCGGT GTCCGACGGC 
AACGGCCGTG CGCTCCTCAC ACTGGACACC GCCGCGGCGC CGCGGGGGCC CCTCACCATC 
CGGGTGGACC GGGCGTCCGC CATCCCCGAC CCGGCGACCG TCGGCGCAGG CGCACCGGTG 
TACGTACAGC TCTACAACCG AGCGGGGCAG GACCCGGCCA CGCCCGACAC CGCGCCGGAG 
GGCATGACCC TGCAGTGGGC CGAGGAGTTC ACCGGCCCGC TGTCGGTCAG CGCCACCGGC 
GCCGGGGCCG ACTACGCGGC ACTCAAACCC GATGCCTCGA GCAGCGGCCA GTTCGGGGAC 
GCACCGTTCG CCGACCCAGC TTCCGAGGCC GGGACGCTCA CCACCGTCGA CGACGAGTAC 
CTGCGGATTC GCACCCAGCC CATCCCGTCC GCCAGCAGCC GCGACGGCAC CGCAAACGTC 
GCCGGCCTGC TCGCCTCCAC CGACGTCGAC GGGGCCGGCT TCGCGGCCCA GTACGGCTAC 
TTCGAGGCCC GGATGCTGGG CGCACCGGGA CCTGGGACCT GGCCGGCGTT CTGGATGCTG 
AACACGGAGA GCGCCGCGCG CCCGAGTCGG ACGGCGGCCG AGGTGGACGT CGTGGAGCTC 
TATGGGCACA ACACGCTAGG CAGCTGCCAC ACGGTGCACA ACTGGGGTGC CGAGGACGAG 
GTCGAGTCGG ATGCCGGTGC GCCGTCCTGC CTCGACCGCA ACGACTTCGC CGACTGGGCC 
GTCGCCTGGC ACACCTACGG CGCGCGGATC ACGCCTGACG CCGTCACCTT CACGATCGAC 
GGGGAGGTGG TGGCAACAGC CGGCCGGCTG CAGCTGACCT CCGAGCCCTT CTTCTTCTTG 
CTCAACCTGG CTCTTGGCGG CGGGTGGCCG GTCGACCTGT CGGCGACGGG GGGCATCTCG 
GACCTGTACG TCGACTGGGT GCGCGTCTAC TCGTGA 

 

Protein sequence

MPSRKRLLVL SAVVVAAFVV AVVVVVLRTP AAPSVTASSG TDPADLVGNE DRDVGWRTDE 
ETVGAWVELA YPEPTAVDRV QLLGPGGGDT GATSALLTFD GGGELLVTTD DAGDASVDFP 
ERTVSWVRVT VAGVPDGATS VALAGLTVDG SADDPPRRGS RGPVTAETSS EGSAPAAALS 
DGTPAEGDTG DEWTPADGDD RPWARLTWDT PREVASVQVF GPSSAGDDAD VPLSGVLRFD 
DGSSVRVSAI ASGGHEGTTI AFAPRMATAV RLELDAAAGL REFAVYDAGT TPPRWPQDGD 
TYAVSPQPAG TCEASSDPFV QPEPGRLTLV CPSPGSVVDG RTDVVVAADP GTAVEARVWT 
GGPATGTNAV DVVATAVSDG NGRALLTLDT AAAPRGPLTI RVDRASAIPD PATVGAGAPV 
YVQLYNRAGQ DPATPDTAPE GMTLQWAEEF TGPLSVSATG AGADYAALKP DASSSGQFGD 
APFADPASEA GTLTTVDDEY LRIRTQPIPS ASSRDGTANV AGLLASTDVD GAGFAAQYGY 
FEARMLGAPG PGTWPAFWML NTESAARPSR TAAEVDVVEL YGHNTLGSCH TVHNWGAEDE 
VESDAGAPSC LDRNDFADWA VAWHTYGARI TPDAVTFTID GEVVATAGRL QLTSEPFFFL 
LNLALGGGWP VDLSATGGIS DLYVDWVRVY S