| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0358 |
|---|
| Symbol | |
|---|
| ID | 8752008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 385504 |
|---|
| End bp | 386976 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | capsular exopolysaccharide family |
|---|
| Protein accession | YP_003407524 |
|---|
| Protein GI | 284988970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCC AAGGAGTACT CGCCGCCCTC CGCTCAGGGT GGTGGTTGCT CGTCATCGGG
ATGCTCTTCG GCGGAGCTGC CGGGCTGGGG GGGAGTCTGC TCCAGACTCC GGTGTACGTG
TCCTCCACAC AGTTCTTCGT CTCGACCACC GGCTCCGCGT CCACGTCAGA GGCCTACCAG
GGCAGCCAGT TCTCCCAGGA GCGGGTCACG TCCTACGTCC GGCTCCTCAC CGGCGACGAG
TTGGCCGGAC GGGTCGTTGA CCGCCTCAAC CTCGACATGG GGCCTGAAGA GCTCGTGCAG
CGGATGTCGG CGACTGCGGC CTCGAACACC GTGCTGATCG ATGTCTCGAT CTCGGACCCG
TCGCCGGAAC AGGCGCAGCG CGTCGCGACA GTGCTGGGGC AGGAGTTCCC TCAGTTGGTG
TCCGAGTTGG AGACCCCCGA CGGCGGGGGG AGTTCTCCGG TGAAGGTCAC GGTCACGGAG
CGTCCCGAGG CGCCGGCCAC CCCGGTGGCA CCGCGGCCGC GTCGCAACGC CGCCCTGGGC
GTCGCCATCG GACTGCTCGT GGGGATCGGC CTCGCGGTCA CCCGCGTGCG TCTGGATCGG
ACCGTCAAGG CCCTGGACGA GGCAGCATCG CTCGTGGGCG CTCCCGTGAT CGGCACCGTC
GTCCGTGACG CCCACCTCGA GAAGAGGCAC ATCGCCGACC GTCGCGGGAA CCGCCGGACG
GCGGAGGACT ATCGCCAGCT CCGTACCAAT CTCCAGTTCC TCAACGTCGA CGCGCCGCCG
AGAGTGATCA TGGTGTCCAG CGCGCTGCCG TCGGAGGGGA AGACGACCGT CGTCGTCAAC
CTGGCCTTGG CGCTCGCCGA CGTTGGACAG CGGGTGACCT TGGTCGACGC CGATCTGCGA
CGGCCGCAGG TGACCAGCTA CCTCGGTCTG GTCGGGGGTG TCGGGCTGAC CAACGTTCTC
GCGGGAACCG CGGACATCGA CGACGTGAAG CAGACCTACG GTGAGGGCCT GTCGGTGGTT
GCGGCTGGTC CCACACCGCC GAACCCCGGT GAGCTGCTCG CCTCGAGCAA CATGGCGAGG
CTCGTCGAGA AGCTCCGCGG GACAGGCGAT TTCGTGATCA TGGACGCGCC CCCTCTCCTC
CCGGTGGCTG ACGCCATCGG GCTCGCTCCC GCACTGGACG GCGTCCTGCT GTCCGTCCGG
TTCGGCTGCA CGAGGAGGGA CCAGCTGCAG CAGGCTGCGG CCGCGCTCTC GCGAGTGGGG
GCCACGACGC TCGGCGTGAT ACTCAACATG CTGCCGCCGC AGGACGAGTT GGCCGCCGCA
TACGGCTACG GCTACGGCTA CGAGAGGAGT GCCGCGGGGA ACCCTGGGAC CAGGGAGGGA
GCCGTCCCTC AGCGGTTCTT CCGGCGAGTG AGGTCGAGCA GGAGGCGGCA CGGGCAGCCC
CGTCGTCTGT CTGCCACCGG ACAGGACAGC TGA
|
|---|
| Protein sequence | MDLQGVLAAL RSGWWLLVIG MLFGGAAGLG GSLLQTPVYV SSTQFFVSTT GSASTSEAYQ
GSQFSQERVT SYVRLLTGDE LAGRVVDRLN LDMGPEELVQ RMSATAASNT VLIDVSISDP
SPEQAQRVAT VLGQEFPQLV SELETPDGGG SSPVKVTVTE RPEAPATPVA PRPRRNAALG
VAIGLLVGIG LAVTRVRLDR TVKALDEAAS LVGAPVIGTV VRDAHLEKRH IADRRGNRRT
AEDYRQLRTN LQFLNVDAPP RVIMVSSALP SEGKTTVVVN LALALADVGQ RVTLVDADLR
RPQVTSYLGL VGGVGLTNVL AGTADIDDVK QTYGEGLSVV AAGPTPPNPG ELLASSNMAR
LVEKLRGTGD FVIMDAPPLL PVADAIGLAP ALDGVLLSVR FGCTRRDQLQ QAAAALSRVG
ATTLGVILNM LPPQDELAAA YGYGYGYERS AAGNPGTREG AVPQRFFRRV RSSRRRHGQP
RRLSATGQDS
|
|---|
| |