| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0095 |
|---|
| Symbol | |
|---|
| ID | 8751741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 104106 |
|---|
| End bp | 105452 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | permease for cytosine/purines uracil thiamine allantoin |
|---|
| Protein accession | YP_003407275 |
|---|
| Protein GI | 284988721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.209676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGT CGGACGACGT CCGCACCAGC ACGTCCACCG GGGACGCGCC CCTCACCCTC
ACCGAGGCCC CCGCCGCCAC CCTCGGCCTG CGCGACGCGT TCGGGCTGTG GGCCAACCTC
GGCGTCAGCC TGCTGCTGCC GGTGGCCGCC GTCTTCGTCG TCCTCCCGGG CCGGCCGCTG
TCGACGACGA TCGGCGCGAT CGTCGTCGGC GCGGCGATCG GCGCGGTCCT CCTCGGGCTG
GCCGCCGCGG CCGGCGCCCG CGAGCGGGTG CCGACGATGG TGCTGCTGCG CGGCCTGCTC
GGCCGGCGCG CCTCCGCCCT GCCCACCGCG CTGAACCTCG TGCAGTGCGT CGGCTGGGCC
ACCTTCGAGA TCGTGATCAT CGCCGAGGCG GCGTCGCGGG TCCTCGACGC GCCGCGCTGG
CCGTTCGTGC TGGTTGCCGG CGTGCTGGCC ACCGCGATGG CGCTCCGGCC GCTCGGCGTC
GCCCGGGTGC TGGCGCGCTA CGCGATCTGG GCGGCGCTGG CCGCCGTCGT CTACCTGTTC
GTCGAGGTGC TGGCCGAGCC GCTGCCGCTG CTCACCGAGG GGGCGGCGAC GTCGTTCTGG
ACGGCGGCCG ACATCGTGAT CGCGCTGCCC GTCTCCTGGT TCCCCCTCGT CGCCGACTAC
ACCCGCCACG TGCGCAGCGG CCGGGCGGCC TTCACCGGGG CGGCGGCCGG CTACGGCCTG
GCCACCGTGG CGATGTTCAC CCTCGGCGTC GTCGCGCTGG CCGCCTACGG CAGCGCCGGG
TTCGACGTCA TCGACGCGCT GCTCGCCGTT CCGCTCGGGG CGGTGGCCGT GCTGGTCCTC
GTCTCCGTCG AGCTGGACGA GGCCTTCGCC AACGTCTACT CCACCGCCGT GTCGGCGCAG
AACATCGTCG CCCGTGCCGA CCGCCGGCTG CTCGCCGTGT GCGTCGGCGC CGTCGCCACG
GTGCTGGCGC TGACCTTCGA CATCGCCGCC TACGAGCCGT TCCTCTTCCT CATCGGCGCG
GTGTTCGTCC CGCTGGCCGG CGTCCTCGCC GTCGCCTACT TCGCCACCCC GCGCGGCGCC
TGGGACACCT CCGACACCGC CCCCGCCCGG CCGCTGCTCC TGCTGCCGTG GCTCGCCGGC
TTCCTCGCCT ACCAGCTGAC GCTGCCGACC TACTTCGCCG GGCCGGGGGC GGGCTGGACG
GCGTGGTGGG CCGCCCGCCA GGCCGACCTC GGCATTACCC CCGCCAACGG CTGGTCGGCG
TCCCTGGTCG GCCTCGCCGT CGCGGTGTCG CTCACCGCGC TGGTCATCCT GCCCGGCCGG
CTGTGCCGGC GGAGGATCCC CGCATGA
|
|---|
| Protein sequence | MSTSDDVRTS TSTGDAPLTL TEAPAATLGL RDAFGLWANL GVSLLLPVAA VFVVLPGRPL
STTIGAIVVG AAIGAVLLGL AAAAGARERV PTMVLLRGLL GRRASALPTA LNLVQCVGWA
TFEIVIIAEA ASRVLDAPRW PFVLVAGVLA TAMALRPLGV ARVLARYAIW AALAAVVYLF
VEVLAEPLPL LTEGAATSFW TAADIVIALP VSWFPLVADY TRHVRSGRAA FTGAAAGYGL
ATVAMFTLGV VALAAYGSAG FDVIDALLAV PLGAVAVLVL VSVELDEAFA NVYSTAVSAQ
NIVARADRRL LAVCVGAVAT VLALTFDIAA YEPFLFLIGA VFVPLAGVLA VAYFATPRGA
WDTSDTAPAR PLLLLPWLAG FLAYQLTLPT YFAGPGAGWT AWWAARQADL GITPANGWSA
SLVGLAVAVS LTALVILPGR LCRRRIPA
|
|---|
| |