Gene Gobs_0086 details

Gene Information

• Locus tag: Gobs_0086
• ID: 8751732
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 93357
• End bp: 95414
• Gene Length: 2058 bp
• Protein Length: 685 aa
• Translation table: 11
• GC content: 76%
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_003407267
• Protein GI: 284988713

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.65346
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACCTGG ATCGGACGCC GGCGGAGACC GGGGACCCCG ACCCGGAGGC CGCGGCCACC 
CGCCTGCGCT TCGAGCTGGC CATCGACGCG GCCGGGATCG GCAGCTTCGA CTGGGACCTG 
CAGACGGGCC GGCTGGAGTG GGACGACCGG CTGCTGGATA TCTTCGGTTA CGACCGGGCC 
GGCTGGCCCG GCACCATCGA CGCCTTCGCC GAGCGTCTCC ACCCCGACGA CGCGGCCCGC 
ACCCTCGAGG CGCTGCAGGG CGCCATCGAC ACCCAGGGGG AGTACGACGC GGAGTTCCGG 
GTCGTCCGGC CCACCGGCGA GACGCGCTGG GTGCAGGGTC GCGGCCGGGC GCTGGCCGAC 
GAGGCCGGGA CCTCCGTGCG CCTGCTGGGG GTGGGGTACG ACACGACCGA GCACCGCCAG 
GCGGACGCCC GCGTGGCCCG GGTGCTCGAG TCGATGAACG CCGCGTTCTT CGCCCTGGAC 
CGCGACTGGC GGTTCACCTA CGTCAACGGC GAGGCCGAGC GGGTGCTGGG CCGCTCGCGC 
GGCGACCTGC TGGGCGGCGA CATCTGGGAG CTGTTCCCCG CCGCCGTGGG CAGCGACTTC 
GAGGTGCACT ACCGCGGGGC GGCCGCCACC GGGCACGAGC GCGTGTTCGA GGCCTACTAC 
CCGGCACCGC TGGACGCCTG GTACGAGGTC CGGGCCTGGC CGGGGCCCGA CGGGCTGTCG 
GTCTACTTCC TCGACGTCAC CGAGCGCCGG GCCGCCGAGG AGCGGGCCCG GGTCAGCGCC 
GCCCGGCTCG CCCTCATCGC CGAGGTGGGC GCGGTGACCG GCGAAACCCT GGGCTCCGGT 
GCGGGTGAGG ACGCCGCGAT GCAGCGGCTC GCCGAGGCCG TCGTCCCCGT GCTGGGGGAC 
TGGGTGATCG TCAGCCTCAC CGGCGAGGAC GGCCGGATGC GCGACGTCGG CAGCTGGCAC 
ACCGACCCCG CGCTGCGGAC GACCGCCGCG CGCTACGCGG AGCTGCGCCT GGCCGCCCTG 
CAGTCCGACG CGCCGATCCT GCGGGCGCTG GCCTCGGGCC GGACGCTGAC CGTCCCCGAC 
GTGGGCGCGG CCGTCGGCCG CACTCTGCCC CCGGGCGAGG TCAGCGACGT GTTCTGGGCC 
CTCGACCCGC GGACGGCGGT GACGCTGCCG CTGGCAGCCC GCGGGCGCAC GCTGGGCGCG 
CTGAGCGTCT ACCGCTCCGC CGGCCGGCTC GCCGCGGACG AGGACGACGT CGCCACCGCC 
CAGGAGGTCG CCGCGCGGGT CGCGCTGGCG CTCGACAACG CCCGCCTCTA CGAGCAGCAG 
CGCCGACTGG CCGAGGGCCT GCAGCGCAGC CTGCTCAGCG CCCCGCCGGC GCCGGACGCC 
GCGGAGATCG TCGTCCGCTA CCGGCCGGCG ATGGAGGTCG CCCAGGTCGG CGGCGACTGG 
TACGACGCCT TCGTCCAGCC GGCGGGGACG ACGATGCTGG TCATCGGGGA CGTCGTCGGA 
CACGACACCG AGGCCGCGGC GTCGATGGGG CAGCTGCGGG GGCTGCTGCG CGGCATCGCC 
TACCGGGAAG GCGTCGGGCC GGCGCAGGTG CTCAGCGACC TCGACCGCGC CGTGCAGGGG 
CTCGGCATGG CCACGATGGC GACCGCGGCC GTGGCCCGGG TCGAGCAGAC CCCCGAGCAG 
CGGGACGCCG GGCTGACCAC GCTGCGCTGG TCCAACGCCG GGCACCCACC GCCGCTGGTG 
CTGCACACCG ACGGCCGGGT GCAGGCGCTG GGCGCCGAAC GGCCGGACCT GATGCTCGGC 
GTCGACCCGG CGGCGCGGCG CACCGAGAGC GTGGTCACCG TGCGCCGCGG AGCGACCCTG 
CTGCTCTACA CCGACGGCCT GGTGGAGGGC CGCGACCTCC CGCTCGACGA GGGCATCGGC 
CGGCTGCGCG CCGCGCTGGC CGAGCTCGGC GACCAGCCGC TGGAGCGGCT GTGCGACGCG 
GTCATCGAGC GGCTGCGCCC GGAGCGGCTG CAGGACGACA TCGCGCTGGT GGCGATCCGC 
CTCCACCCGC AGGGCTGA 

 

Protein sequence

MNLDRTPAET GDPDPEAAAT RLRFELAIDA AGIGSFDWDL QTGRLEWDDR LLDIFGYDRA 
GWPGTIDAFA ERLHPDDAAR TLEALQGAID TQGEYDAEFR VVRPTGETRW VQGRGRALAD 
EAGTSVRLLG VGYDTTEHRQ ADARVARVLE SMNAAFFALD RDWRFTYVNG EAERVLGRSR 
GDLLGGDIWE LFPAAVGSDF EVHYRGAAAT GHERVFEAYY PAPLDAWYEV RAWPGPDGLS 
VYFLDVTERR AAEERARVSA ARLALIAEVG AVTGETLGSG AGEDAAMQRL AEAVVPVLGD 
WVIVSLTGED GRMRDVGSWH TDPALRTTAA RYAELRLAAL QSDAPILRAL ASGRTLTVPD 
VGAAVGRTLP PGEVSDVFWA LDPRTAVTLP LAARGRTLGA LSVYRSAGRL AADEDDVATA 
QEVAARVALA LDNARLYEQQ RRLAEGLQRS LLSAPPAPDA AEIVVRYRPA MEVAQVGGDW 
YDAFVQPAGT TMLVIGDVVG HDTEAAASMG QLRGLLRGIA YREGVGPAQV LSDLDRAVQG 
LGMATMATAA VARVEQTPEQ RDAGLTTLRW SNAGHPPPLV LHTDGRVQAL GAERPDLMLG 
VDPAARRTES VVTVRRGATL LLYTDGLVEG RDLPLDEGIG RLRAALAELG DQPLERLCDA 
VIERLRPERL QDDIALVAIR LHPQG