Gene Htur_5287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_5287 
Symbol 
ID8745934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013749 
Strand+ 
Start bp15190 
End bp15813 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content60% 
IMG OID646515740 
Productintegrase family protein 
Protein accessionYP_003406687 
Protein GI284176412 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones159 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCGG ACACCACCGA CGGTGCAAAC CCCGACGTTC ACTCACGGAC CTGGCTGAAA 
CCCGCCCAGG TCGAACGAAT GAAAGACGCC TGTCTCACTG AGGAGTTCCC CACCTACCTA 
CAGGATCGAA ACCTCGCGAT TGTCTCACTC CTCTACGACA CCGGGCTTCG AGCAAGCGAG 
CTCGTCTCGC TCGATACCCG CCACCTGGAA CTTGAGGACT CCCGGCTCTT GCTCCCCGGC 
AGTATCCAGA AAGGAAACGC GTCGTCAGCC TCGCTCGAAT TAGGGAAGTG GGGCGCGGAT 
TCGACACGAG ACCTGCGTAG GTACCTCCGA GACCGCTGGA AGGACACCGA CGCGTTATTC 
CCTTCGCGAT CGAGCGACCG GCTCTCACGC CGCTCTCTGC AGCGTCTCAT CGGCCGCGTC 
GCAGAGGTGG CCGACGTCGA GCCGTACACC GAGGACTTTG AACAGGTGGA TCCGAGCCAC 
GTCCACCCGC ATACGCTTCG ACATTCCGTT GCCTATCGGA TCATCGTCGA GGAAGAAGGA 
CGGCTTGAGG ACGTGCAAAT GCGACTACGT CACGCGAACA GATCAACGAC GGACCGGATT 
TACTCCCACT ACGTCGTGAG ATGA
 
Protein sequence
MPADTTDGAN PDVHSRTWLK PAQVERMKDA CLTEEFPTYL QDRNLAIVSL LYDTGLRASE 
LVSLDTRHLE LEDSRLLLPG SIQKGNASSA SLELGKWGAD STRDLRRYLR DRWKDTDALF 
PSRSSDRLSR RSLQRLIGRV AEVADVEPYT EDFEQVDPSH VHPHTLRHSV AYRIIVEEEG 
RLEDVQMRLR HANRSTTDRI YSHYVVR