Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_5252 |
Symbol | |
ID | 8745800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013747 |
Strand | - |
Start bp | 152603 |
End bp | 154399 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 646515609 |
Product | hypothetical protein |
Protein accession | YP_003406556 |
Protein GI | 284176279 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGGA CGACGTTCAA CGGCCTCGTT GCCGGCGGAT TCCTCGCGGT CGCGATCGGG ATCCTCGTCG CGAGAGCGAG CCCGGCGACG AGCTACGAAC CGTCGATATA CACGGGAACG CCGACGCTCA CGTGGATCGG ATTCGGGATC GCCCTCGCCG TCGCCGTCAG CGCGGCGCTC GTCTGTCGCG GCCGCGAGCA GGCGCTGGGA ATCGCGCTCG GCGGGACGAC GGTCACGGCG ATCGTCAGCC TGCCGGTGAT CAGGAACTAT CGGTTCCTGG GGATGGGCGA CGGACTCTCC CATCTCGGCT GGACGCGGGA CATCGTCGCG GGGCAGATGG CGCCCCACGA ACTGTTCTAC CCCGCCGTTC ACACGATCGC GGCGGCCTTT CACTACGTCG GCGGCATCCC GATCGAGCGC GGACTCCTGT TCAGCGTCGT CATCCTGTTC GTCCCGTTCC TGATCTTCGT CCCGCTGATC GTCCGGGAGA TCGCCGGCGA CGGACTGGCG ATCGGGATCG CGGCGATCGT TTCATGGATG GTGTTACCAA TCAACAACGT AGCGACGCAC ATGGGCGTGC ACACGAACTC CAACGCCCTC TTTCTGGTGC CGGTCGTCGT CTTCGCGTTC GTCGCGTACC TCCGGCGCCG GGCGACGATC GAGCGCCTCC CGCTTGGGCT GTCGCCGTTC AGCCTCCTGA TCTACCTCAC GGGGCTCGGG CTCTTACTGG TCCACCCCCA GCACATGATC GGCGTCATCG TGTTGATCGG CTCGATCGCC AGCATCCAGT ATCTCGCCCG GCGACGGTAC GACGATCATC CCATGCTCGA TCACCCCACG ATGTACGCCC ACACGGTCGT GCTCAGCGCC ATCTTCACCG TCTGGGCCGT GAGCAACCAG CGGTTCCGCG ACGCCTTCGC CGGCCTCATC ATCGGCATCT TCGAGGAGGA CATCGGCGGT GGAGCCGAGG TCGGACAGCG CGAGTCCTCC CTTCAGGAGA TCGGCGGCAG TATCGCTGAA CTGTTCGTTA CGATGTTCCT CGAGCTGGCG ATTATCGCGC TCGCCGTCGG CGTCTTCGTA CTGCTGGTCT GGCTCGGGCG GACCGCGCTC GATCCGGAGA CGAAATCCCA GATCAACTAT CTCTCGCTCT CGCTGTTCCC GCTGACCGGA CTGTTCTTCC TCTACTTCGT CGGGACGCCG ACGATGGCGT TCCGGCAGGT CGGTTTCATC GCCGTCCTGC TGACGGTGCT GGCGGGCATC GCGCTAGCCC GCGGTGTCGG CGCGCTTTCG GGTGTCATCA CGCGCCCGGG CGCCAGCGCC GTCACGGCGC TCCTCCTCGG CGGCTGTCTC GTCCTCGGGC TGATGACGGT GTTCGCTTCG CCGATCATCT ACAGCCCCGG CCAGCACGTG ACCGACGAGA CGTTCAGCGG CTACGAATCC GCGCTGGACC ACTCGAGCGA GGACACGCCC CTCGTCGGGA TGGGACACAA CCCGTACCGG TACGACCACG GGCTCAACGG TCTCGAGGGA GAGGGCACCC TCTCGGCCGG CTCGTCCACG ACCGGGACCG TCGATCCGGA GACGTTCGAA GCGGGCGACT ACGACGAGGC GTATCGCGGC ATCGACTACA ACTTCGTCGT CACCGAGTAC GACCTCACGC GCGAGCTCGA GGTCTATCAG GAGCTCCACT ACAGCGACGA GTCCATCGAG GACTTCGAGA CCGACTCGAG CGCCAACAAG GTGATCTCGA ACGACGAGTT CCGGATGTAC ACCGTCGACG GCGCGGAAGA AGAGTAA
|
Protein sequence | MKRTTFNGLV AGGFLAVAIG ILVARASPAT SYEPSIYTGT PTLTWIGFGI ALAVAVSAAL VCRGREQALG IALGGTTVTA IVSLPVIRNY RFLGMGDGLS HLGWTRDIVA GQMAPHELFY PAVHTIAAAF HYVGGIPIER GLLFSVVILF VPFLIFVPLI VREIAGDGLA IGIAAIVSWM VLPINNVATH MGVHTNSNAL FLVPVVVFAF VAYLRRRATI ERLPLGLSPF SLLIYLTGLG LLLVHPQHMI GVIVLIGSIA SIQYLARRRY DDHPMLDHPT MYAHTVVLSA IFTVWAVSNQ RFRDAFAGLI IGIFEEDIGG GAEVGQRESS LQEIGGSIAE LFVTMFLELA IIALAVGVFV LLVWLGRTAL DPETKSQINY LSLSLFPLTG LFFLYFVGTP TMAFRQVGFI AVLLTVLAGI ALARGVGALS GVITRPGASA VTALLLGGCL VLGLMTVFAS PIIYSPGQHV TDETFSGYES ALDHSSEDTP LVGMGHNPYR YDHGLNGLEG EGTLSAGSST TGTVDPETFE AGDYDEAYRG IDYNFVVTEY DLTRELEVYQ ELHYSDESIE DFETDSSANK VISNDEFRMY TVDGAEEE
|
| |