Gene Htur_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_5243 
Symbol 
ID8745791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013747 
Strand
Start bp139293 
End bp140294 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID646515600 
Producthypothetical protein 
Protein accessionYP_003406547 
Protein GI284176270 
COG category[R] General function prediction only 
COG ID[COG4026] Uncharacterized protein containing TOPRIM domain, potential nuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.372333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCGT CAGCACCTGA CACGGACGCA TCGCCGTCGA ACAACCCTGA CCAGACCGCC 
CACAACGGCG CGTTCGAACG ACTTCGCGAG CGCCTCGAGT CCCTCGAGGC CGAACTCGAG
CGCAAGGACG ACCGCATCGC GGACCTCGAG CACGACCGCG ATCGGCTCGC GGCGACCGTC
GACGAACTCG TGAAGCGAAA CGCGGACCTC GAAGCGCGCA CCGATGATCT CGAGGACGAG
GCCGCTGTTC TCGAGGAACG AACCACCGAC CTCGCTACCG AGACCACCGA ACTCGAGGGC
CTCACCGAAG CCGCGTGCAA CAAGGCCAAC GCCAACAAGG AGCGCGTCGC GGAGCTCCAG
TCCCGCGAAC TCGAGAAGGG CGCCCACCTC GAGACCGACA ACGTCGACGA GTGCGCGGTC
ACCGTCGCCG ACGGCCGCCT CGAGCGCATC GCGAAGGACG ACGGGCACGC CTACTACCGC
CTCCCCGAGA GCGCCGACCC GCTCGAGCGC GGCGGCGACG TCTCGCTGGC CTTCGGCGAC
CTGCTCCCGA TCCAGCAGCT CGCGCGGATG GACGACGACC GCCGCCGCGC CGCGGCGAAC
TCGATGCCCA CCAGGCTCGC CGCGAAGCTC TGGCGGGCCC GGACCGACCC GAGCGTCGGC
GACGATCCGT GGGAGCGCGG CTGCAAGGAC GTCGCCGAGT ACGTGAAAGC CAGCGACCTC
AGACACTGGA TCCGCCGCCG GGAGCCGGGC ATCTCCGAGA GCTACGCGAA GAAGCTCGTC
TCGCGGACGA TCGACGCCGC CCTGGACCTC TCGAAGAACC GGCTCGCGGT GCGCCGGCAG
ACCGAACGCA AGAACGGCCT CGAGTACACC GAACGACGGC TGCTCCTCCC CGCGGACGCC
TCGATCCCCG GCGCGGGGAG CCGCGACGGC GCGACGGCGA CCCGAGACGA GGCCGGCGAG
TCGGATCGAC CGGACCCGGA GACAACTGGC GTCCACGGCT AG
 
Protein sequence
MPSSAPDTDA SPSNNPDQTA HNGAFERLRE RLESLEAELE RKDDRIADLE HDRDRLAATV 
DELVKRNADL EARTDDLEDE AAVLEERTTD LATETTELEG LTEAACNKAN ANKERVAELQ
SRELEKGAHL ETDNVDECAV TVADGRLERI AKDDGHAYYR LPESADPLER GGDVSLAFGD
LLPIQQLARM DDDRRRAAAN SMPTRLAAKL WRARTDPSVG DDPWERGCKD VAEYVKASDL
RHWIRRREPG ISESYAKKLV SRTIDAALDL SKNRLAVRRQ TERKNGLEYT ERRLLLPADA
SIPGAGSRDG ATATRDEAGE SDRPDPETTG VHG