| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_5200 |
|---|
| Symbol | |
|---|
| ID | 8745748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013747 |
|---|
| Strand | + |
|---|
| Start bp | 90362 |
|---|
| End bp | 91024 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646515557 |
|---|
| Product | 2,5-diamino-6-hydroxy-4-(5- phosphoribosylamino)pyrimidine 1-reductase |
|---|
| Protein accession | YP_003406504 |
|---|
| Protein GI | 284176227 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.63994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTCG TCGTCAACGC CGCTACGAGC GCGGACGGCA AACTCTCCTC GCGGCGCCGC
GAGCAGATCG CGATCAGCGG CGAGGCGGAC TTCGAGCGCG TCGACCGCCT CCGAGCCTAC
AGCGACGCCG TCGTCGTCGG CGTCGGCACC GTCCTCGCCG ACGATCCGCA CCTGACGGTG
AAGGACGAGT CGCTGTGTGA CGAACGCCTC GAGCGGGGCG AGCCGAAACA GCCGGCCCGC
GTCGTCGTCG ATTCGAAAGG GCGCACCCCG ACCGACGCCG CGGTGCTGGA CGACGCGGCG
ACGACCTACG TCTGCCTGAG CGAGGCCGCC CCCGTCGGTT CGCGGATGGA CCTGGTCGAC
CACGCGGAGC TCGTGACCGC CGGCAACGAC CGGGTCGACC TCCTGCGGGC GTTCGCGGCG
CTCGAGGAGC AAGGCCTCGA GCGGATCATG GTCGAGGGCG GCGGCGAGCT CATCTTCTCG
CTGTTCGAGG CCGGACTGGT CGACGAGTTG CGGCTGTTCG TCGGCCCGAA AGTAATCGGC
GGCCGCGACG CGCCGACGCT GGCCGACGGC GAGGGGTTCG TCGAGGAGTT TCCGCTGTTG
CATCTCGAGG ATCTCGAGCG ACTGGACGAC GGGGCCTTGC TGCGGTGGAC GGTAGAGGAC
TGA
|
|---|
| Protein sequence | MHVVVNAATS ADGKLSSRRR EQIAISGEAD FERVDRLRAY SDAVVVGVGT VLADDPHLTV
KDESLCDERL ERGEPKQPAR VVVDSKGRTP TDAAVLDDAA TTYVCLSEAA PVGSRMDLVD
HAELVTAGND RVDLLRAFAA LEEQGLERIM VEGGGELIFS LFEAGLVDEL RLFVGPKVIG
GRDAPTLADG EGFVEEFPLL HLEDLERLDD GALLRWTVED
|
|---|
| |