| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_5195 |
|---|
| Symbol | |
|---|
| ID | 8745743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013747 |
|---|
| Strand | - |
|---|
| Start bp | 85043 |
|---|
| End bp | 86896 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646515552 |
|---|
| Product | conserved hypothetical protein-like protein |
|---|
| Protein accession | YP_003406499 |
|---|
| Protein GI | 284176222 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3390] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA ACGGCAACGG CGAGGACGAC GAGGAGATTC CGGGACGCGA AGTCGCCTAC
CGACTGTTCG CCGCCGAGTA CGACGACGCG TCGTTCTCCT ACGCCGAGAG CGACGAGGAA
CGGGCACCAA ACTACGTCAT CTCGCCGACC GGCGCGCGGC TCAACCGCGT CTTCACCGTC
GGAACACTCA CCGAGATCAC CGCGGTCAAC GACGAGATGG TCCGTGCCCG CGTCGTCGAT
CCGACCGGCG CCTTCGTCGT CTACGCCGGT CAGTACCAGC CCGACGAACT CGCGACGCTC
GAGCAACTCG AGCCGCCCGA ATTCGTCGCG GTAACCGGGA AGGCCCGAAC CTTCCAGCCC
GACGACTCCG ATCAGGTCTA CACCTCGCTC CGTCCGGAGA GCATCGCGAC GGTCGATGCC
GACACCCGGG ACCGCTGGGT CGTCAGCGCG GCCGAGCAGA CTGTCGAGCG CGTCGGCACC
TACGCCGCGG CCGCAGAAAG CGACGCGAGT GGAGACGCCC TGACCGACGC GCTCCTCGAG
GCCGGCGTCG ACAAGGGCCT CGCGGCGGGG ATCCCGCTCT CTCAGGACCA CTACGGGACG
ACGCCGGACT ACCTCGCGGC CCTGCGCGAC TGCGCCCTCG AGGCCGTCGA GGTCGTCGCG
GGCGAGCGCG ATCAGGTCGA GGCGTTCTCG CTCGCGCCCG ACGGCTCGGG TCCCGACGCC
GACGCCTCGT TCGCGTCGCT GGCCGACCTC GTCGACCTCG ATCTCGGGGG TCTCGAGTCG
GCCGCTGCCC CCGAGGCCGA ATCCGCAGCC GAATCCGTGC CCGAGCCGGA ACCGGCCGCC
GCCACGGCCG GCACCGGTTC CGCCGCGGGG ACGGCGACGA GCACCGACCG CGAGTCCTCG
TCGGCCGACG TCGACGTCGA CTCCGACAGG GCGGACGCCG CCGAGACGGA AACCGAGCCC
GAGACCGAGA CGGAGACGGA GCCACCGACG GAGTCGACTC CTGAGAGCGC CGAGCCGGCC
GCTGAGACCA CTGAGGCGAC TGCCACCGGT ACTGGGGTGA CGGACGTCGA AGCAGATGCG
ACCGCTGACG TCGCCGATTC CGACGAACCG ACTACCTCCG ACTCCGAACC GGCCGAATCG
ACCGCCGCGT CCGACGAGAC GGACGTCGGC GACTTCGAGA CGACGAGCGA CTCCACCGAG
ACCGATGCCG ACCTCGAGAC CGGCACCGAA GCCGACGACG AGGAACTCGG CGACTTCGAA
GCCGACGACG TCGACGACGG CGGGATGTAC GAGATGGACG AGGAGGAGCG CGAACAGCTC
GAGGAGGAAT TCGGCGCCGA GTTCACGACC GGCGCGGAGG TCGAGGAACC CGGTGAGGCC
GACATCGACG TGCCCGAACC CGACGACGAG CCCGTCGACG AGTTCGAGAC CGAAAGCGAG
GCGGCTGCGG ACGCCGCGAC GACCGATGAA CTCGACGCGT CCGACGAAGC TGCAACCAAG
TCGGCCGACG ACGACCTCGG TGCGCCGCCG GCGTCGGGAC TCGAGGCCGA CGCGGAACCC
GCGGAACCGA ACGAAGACGA GGAACCCGAC GAACCGTCGG AGGGGGGATC CGAAGAGGCC
ACGGCCGACG AACCCGCGGA CGAGGAACCC GCCGAGGACG TCGATCTCGA GGAGTACGTC
GTCGAAACGA TGGAGGACAT GGACGACGGC GACGGCGCCG ACCGGACCGA ACTCGTCGAG
CGAGTCGCCG ACGAGACCGG CGCGTCCGAG GACGAGGTCG AGGACGCGAT CCAGGACGCG
CTGATGGGCG GGCAGTGTTA CGAGCCCAAC GACGAGACCC TGAAGGCGAT CTGA
|
|---|
| Protein sequence | MSANGNGEDD EEIPGREVAY RLFAAEYDDA SFSYAESDEE RAPNYVISPT GARLNRVFTV
GTLTEITAVN DEMVRARVVD PTGAFVVYAG QYQPDELATL EQLEPPEFVA VTGKARTFQP
DDSDQVYTSL RPESIATVDA DTRDRWVVSA AEQTVERVGT YAAAAESDAS GDALTDALLE
AGVDKGLAAG IPLSQDHYGT TPDYLAALRD CALEAVEVVA GERDQVEAFS LAPDGSGPDA
DASFASLADL VDLDLGGLES AAAPEAESAA ESVPEPEPAA ATAGTGSAAG TATSTDRESS
SADVDVDSDR ADAAETETEP ETETETEPPT ESTPESAEPA AETTEATATG TGVTDVEADA
TADVADSDEP TTSDSEPAES TAASDETDVG DFETTSDSTE TDADLETGTE ADDEELGDFE
ADDVDDGGMY EMDEEEREQL EEEFGAEFTT GAEVEEPGEA DIDVPEPDDE PVDEFETESE
AAADAATTDE LDASDEAATK SADDDLGAPP ASGLEADAEP AEPNEDEEPD EPSEGGSEEA
TADEPADEEP AEDVDLEEYV VETMEDMDDG DGADRTELVE RVADETGASE DEVEDAIQDA
LMGGQCYEPN DETLKAI
|
|---|
| |