Gene Htur_5180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_5180 
Symbol 
ID8745728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013747 
Strand
Start bp73302 
End bp74564 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content70% 
IMG OID646515537 
ProductGlutamine--scyllo-inositol transaminase 
Protein accessionYP_003406484 
Protein GI284176207 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACC CGAACACCGA TCCCGACAGC GAAGGGGAGT CCAGAACCGA CGCCGATACC 
GGGCCGGTCA CCGAGGCCGA CGGTGGCGTC GCCGAGGCCG AGACCGAGAG CGACGCGTCG
GCGCCGGAGC CGAGCGACGA GGGCGCCGAG ACCAGCGACT CCGTCTCGAT CGCGAACCCG
ACGCTCAGCG ACGACGCCGT CGAGCGAGTC GAATCGATCC TCGAGAGCGG CATGCTCGCC
GACGGGCCGG AAGTCAGAGC CTTCGAGGAC GAGTACGCCG CCTACTGCGG CACCGACCGG
GCCGTCGGGA CCTCCAACGG GACGACCGCC CTGCACGCGG CCCTCGAGGC GCTTGGCCTC
GAGGAGGGCG ACGCGGTGCT CACGTCGCCG TTTTCCTTCG TCGCGAGCGC GAACGCGATC
AGACTCGCCG GCGGCAAGCC GGTCTTCGCC GACATCGATC CGGAGACGTA CACGCTCGAT
CCGGACGCCG TCGAAGGGGT CCTCGAGGAG CGCGACGACG TCGTCGGCCT GCTTCCGGTC
CACCTCTACG GGCTTGCGGC CGACATGAAG CGGCTCCGCG AGATCGCCGA CGAGCGCGAC
CTGTTCGTGC TCGAGGACGC CTGCCAGGCC CACGGCGCGG CGATCGACCG CGAGCGAGTC
GGTTCGTTCG GCGACGCAGC CTGCTTCTCG TTCTACCCGA CGAAGAACAT GACGACCGGC
GAGGGCGGGA TTATCACGAC CGATCGCGAC GACCTCGCCG ATCGAGCCGC GAGCTTCGTC
AACCACGGCC GGGACGTCGG CGAGGGCGGC AGCTACGAAC ACGTCGACCT CGGCCACAAC
TACCGCATGA CGAGCCTCGC CGCCGCCATC GGCCGCGAGC AACTCGAGCG GCTGCCCGAG
TTCAACCGGG CGCGTCGGGA AAACGCCGCG TACTACGACG AGCGGCTGGC CGAGCTGCCG
GTCGAGACGC CGACGGAACC CGAGGGCTAC CGACACGTCT ACCACCAGTA CACGATCCGG
ACCGACGAGC GCGACGAGCT GGCGGCGACG CTCGACGAGC GAGGCGTCGA CACCGGGATC
TACTACGGGA CGCCGATCCA CCGGCAGCCG GCCTACGAGA CGGTGAGTAC GGCCGCGGCG
ACGCTCCCCG AGGCCGAGCG GGCGGCCGAG ACCGTGCTCT CGCTGCCGGT GCATCCGACC
CTCTCGGAGC GCGATCGACG AACCGTCGTC GAAGCAGTAA CCGACCACTT CCACTCCCAA
TGA
 
Protein sequence
MTDPNTDPDS EGESRTDADT GPVTEADGGV AEAETESDAS APEPSDEGAE TSDSVSIANP 
TLSDDAVERV ESILESGMLA DGPEVRAFED EYAAYCGTDR AVGTSNGTTA LHAALEALGL
EEGDAVLTSP FSFVASANAI RLAGGKPVFA DIDPETYTLD PDAVEGVLEE RDDVVGLLPV
HLYGLAADMK RLREIADERD LFVLEDACQA HGAAIDRERV GSFGDAACFS FYPTKNMTTG
EGGIITTDRD DLADRAASFV NHGRDVGEGG SYEHVDLGHN YRMTSLAAAI GREQLERLPE
FNRARRENAA YYDERLAELP VETPTEPEGY RHVYHQYTIR TDERDELAAT LDERGVDTGI
YYGTPIHRQP AYETVSTAAA TLPEAERAAE TVLSLPVHPT LSERDRRTVV EAVTDHFHSQ