| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_5138 |
|---|
| Symbol | |
|---|
| ID | 8745686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013747 |
|---|
| Strand | - |
|---|
| Start bp | 34379 |
|---|
| End bp | 35758 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646515495 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003406442 |
|---|
| Protein GI | 284176165 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGGC CAGTTACAGC CGATGCAGGG ACGTCGATCC GGACGGCGAT CGCGCGGATC
GACCGCTCCG AGTACAGAGG TATCGTTGTC GTCGACGACG ACGACCGACT TGTCGGAACG
GCGACGGTCG ATCGACTCAG AGGAGCCCTC CGCGACGGCG CCGCGCCCGA CGCACCGGTT
GCGACTGCCG TCGACGAGGA GCCGACCGTC GTCGATGAAG ACGGGACCGT CATCGACGTC
ACGACCGCCG AGCACTTCGA CGGATCCGCG GCCGACGCCG AACCGACGGC TACCGGCGTC
GAGCGGGTGC TCGTCGTCGG CGGCGCGGGA TACCTCGGCT CCGTCCTCTG TCGACAGCTC
CTCGACGACG GGTTCGACGT CCGCGTCCTC GATCCGCTGT TTTACGGCGA CGCCGGGGTC
GCCGAGCTTA CCGACGACGA TCGGTTTACG CTCTACCAGG GTGACGCGCG ATCGGTCGAC
GCGGTCCTCG AGGCGATCGA CGGCGTCGAC GCGGTCGTTC ACCTCGGCGG GATCGTCGGC
GATCCGGCCT CTGAAATCGA CCCCGAGAAG ACCCTCGAGT ACAACCTCCA CTCGACGCAG
CTTCTGGCGT CGCTGTGCAA GTACCACGGC ATCACGCGGT TTATCTTCGC CTCGACCTGT
AGCGTCTACG GCCGCTCCGA CGGCGACGCC GGACGGCTCG CCGAGGACGA CGCTCGCAAC
CCCGTCTCGC TGTACGCCCG GCTGAAGATC CAGTCCGAAC GCGTGCTCCG GGAGTTCGCG
GACGAGCACT TCGCCCCGAC GATCCTTCGG ATGGCGACGG TCTACGGCCG GTCGCCGCGG
ATGCGGTTCG ACCTCGTCGG AAACATCCTC CCTGTGAAAG CCTACTCGGA AGGTGTCGTC
CCCGTCTTCG GCGGCGACCA GTATCGGCCG AACGTCCACG TCGCCGACGC CGCTCGCGCG
TACGTCGAGT GTCTCACGGC GCCGATCGAG GACGTCGGCG ACACCGTCTT CAACGTCGGC
TCGAACGAGC AGAACTATCG GATCGACGAA CTCGCGACCA TCGTCGAGGA CTGTTTCCCC
GACGCGTCGA TCGAATACCA CGACGAACTG ACCGATGAGC GGAGCTACCG CGTCGCGTTC
GACAGGATCC GATCGGTGCT GGACTTCGAG CCGGAGCGAA CGGTCCGCGA TCACTGTCTC
GAGTTACGAG AGGCGTTCGA AGCCGGGCTG TACGAGGAGT ATACGGCCAC CAGGTACAAC
AACTACGAAA CGCTCGATCA GGCCCCGAGC TTCGAAAACA CGACGGCCGT TCTCGAGTCC
GTCGACGACG AGCCGACGAC CGAGCGCCCG CACGAAAAAC TCCCCTCCGG AGAAGTGTAG
|
|---|
| Protein sequence | MRWPVTADAG TSIRTAIARI DRSEYRGIVV VDDDDRLVGT ATVDRLRGAL RDGAAPDAPV
ATAVDEEPTV VDEDGTVIDV TTAEHFDGSA ADAEPTATGV ERVLVVGGAG YLGSVLCRQL
LDDGFDVRVL DPLFYGDAGV AELTDDDRFT LYQGDARSVD AVLEAIDGVD AVVHLGGIVG
DPASEIDPEK TLEYNLHSTQ LLASLCKYHG ITRFIFASTC SVYGRSDGDA GRLAEDDARN
PVSLYARLKI QSERVLREFA DEHFAPTILR MATVYGRSPR MRFDLVGNIL PVKAYSEGVV
PVFGGDQYRP NVHVADAARA YVECLTAPIE DVGDTVFNVG SNEQNYRIDE LATIVEDCFP
DASIEYHDEL TDERSYRVAF DRIRSVLDFE PERTVRDHCL ELREAFEAGL YEEYTATRYN
NYETLDQAPS FENTTAVLES VDDEPTTERP HEKLPSGEV
|
|---|
| |