Gene Htur_5124 details

Gene Information

• Locus tag: Htur_5124
• ID: 8745672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013747
• Strand: -
• Start bp: 23507
• End bp: 24142
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 646515481
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003406428
• Protein GI: 284176151
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.451172
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACTCA TCGCGGAGTT CCGGCTGACG TCGCTCGATC TCCCGCTGAC GGACACGGTC 
GCGGCCGTCC CCGGGATCAC GGTCTACATC GAACGCATCC TCGTCGTCGA TCCCGACCGA 
CCCGCCGTCC TCTGTCGGGT CGTCGACGAC CGTGACGGCG AATTCGGCGC CGCGTTGGCC 
AACGACCCCA CGGTTGCAGA GCAACTTCCA CTGGACAAAT CGAGCGGGAG CACACTCTAC 
CGGATCAAAC TGCGTGATCC GCCGGTCCCG ATCTACCGGA AGTACGTCGA ACTCGGCACC 
ACGCCGCTGG CCGGCATCGT GACCGTCGAC GGCTGGTGGG GACGCGCCCG ATTCCCCGAC 
CGCGAGGCGC TGGCCGAGTT CCGCACGTTC TGCGTCGATC GGGGCGCGTC CTTCCAGCTC 
GAGCGCCTCA CCCGGGAATC GACGGCGGAC GATCCACCCT TCGGCCTCAC GCGGGAACAG 
TACGAGGCGC TCGTCGCCGC CCGAGATGCG GGCTACTTCG CGGTACCGCG GAAGGCCTCG 
ACCGAGGAGA TCGGCGAGCG ACTGGGGATT TCGGGACCGT CGGCTTCCGA GCGTCTTCGC 
CGGGGAATCG ATCGATTGCT CGAGAACGCG CTATAG 

 

Protein sequence

MGLIAEFRLT SLDLPLTDTV AAVPGITVYI ERILVVDPDR PAVLCRVVDD RDGEFGAALA 
NDPTVAEQLP LDKSSGSTLY RIKLRDPPVP IYRKYVELGT TPLAGIVTVD GWWGRARFPD 
REALAEFRTF CVDRGASFQL ERLTRESTAD DPPFGLTREQ YEALVAARDA GYFAVPRKAS 
TEEIGERLGI SGPSASERLR RGIDRLLENA L