Gene Htur_5118 details

Gene Information

• Locus tag: Htur_5118
• ID: 8745666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013747
• Strand: -
• Start bp: 14215
• End bp: 16215
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 646515475
• Product: type III restriction protein res subunit
• Protein accession: YP_003406422
• Protein GI: 284176145
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1061] DNA or RNA helicases of superfamily II

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGACG AACGTGCTTC GGAAGCGACC GGTGGCGAGA GCCAGCGACC CGAGGATCCA 
GCGGCCGACG GGGACAGCGA TCCCACCGGA GACGAGCAGG ACGACGAGCA GTTCACGCTC 
GCGGACTTTC ACGACGCATC GCAGGAGGCA GGGCGACCGG TGCTCACCGC CGCCGCACTC 
TCCCGGGCTC TGGATATCAC TCAGGAACGG GCCCGCAAGG AACTCGAGTT CCTCGCGGAC 
CGAGAGGCCG TCCAGCGCCT CGCCGTCGAA ACGGATCCCG TCGTCTGGTA TCCCAGCGAA 
CTCGAGGACC TCACGGACCG GGAGCGCGTC GTCGTCTTCC CGAAGCGCCG CGAGATAATC 
GTCGATCGAC CGGACCAGTT TACCCGCGCG CAACTCGCCC AGTTCGCCCA CCTCGCGGAC 
GGGAACAGCG AGCAGGGGTA TCGCTACGTC GTCAGGCCCG AGGACATCTG GCAGGCGCCC 
CACGACTCCT GGGAGGCGCT GGCCCGGACG ATGCGCCAGG CGCTCGGCCA GCGCTCCGAG 
GGACTCGAGG AGTGGGTCCG GAGCCAGTGG GATCGGGCCC ACCAGTTCCG GCTGACGACC 
CACGAAGAGG GCTATACCGT CCTCGAGGCC AAGAGTCCCG AGATTATGGG CAACGTCGCG 
CGGCAGAAAC TCGACGAAGA ACACGTCCAC GCGCCGATAT CTGACACCGA GGACTGGGTT 
CGTGAGGGCT CGGAGGCCGC GATCAAGCGA ATCCTCTACG AGGCTGGCTA CCCGGTGCAG 
GATCATCGCG AGCTCGAGTC CGGCGAGGAG CTTCCCGTCG ACCTCGAGGT TCGACTGCGA 
GACTACCAGC GAACGTGGGT CGACCGCTTC GCGGAGGCCG GCGAGGGCGT CTTCGTCGGG 
CCGCCGGGAA GCGGGAAGAC CGTCGCCGCG ATGGGGGCGA TGGCTCACGT CGACGGCGAG 
ACCCTGATTC TGGTGCCGAG CCGCGATCTG GCCCGGCAGT GGGCCGACAC AATCCTCGAG 
TACACCTCGC TCGAACCGGA GCAGATCGGC CAGTACCACG GCGGGCGCAA GGAGGTCCGG 
CCGGTGACGA TCGCGACCTA CCAGATCGCG GGGATGGATC GCCACCGCTC GCTGTTCGAC 
GACCGCGAGT GGGGGCTGGT GATCTTCGAC GAGTGCCAGC ACGTCCCGTC GGACGTCTAC 
CGCCGAAGTA CCCATTTGCA GTCCAAACAC CGACTCGGCC TCTCTGCCAG CCCGATCCGT 
GAGGACGACC GCCAGCAGGA GATCTTCACC CTCGTGGGTC CGCCGATCGG TACCGACTGG 
GAGGCGCTGT TCGAGGCCGG CTTCGTCGCC GAACCGGAAC TCGAGATCCG CTACGTCCCG 
TGGGGTGACG ACGAGCAGGG CAACGCCTAC GCCTCCGCGG ACGGCCAGGA GAAGTACCGG 
ATCGCCGCGA AGAATCGCGG GAAGGTCGAC GAGGTGCGCT ACCTGCTGTC GGCCCACCCC 
GACTCGAAGG CGCTGGTATT CGTCGACTAC TTAGAGCAGG GGAAGGACCT CTCGGCCGCC 
CTCGATGTTC CGTTCCTCAG CGGTGAGACG CCCCACCACG AGCGCCGGCG ACTGCTCGAT 
GAGTTCCGGC GGAACGAGCG GGACCTCCTC ATCGTTTCGC GGGTCGGCGA CGAGGGGATC 
GACCTCCCGA CGGCCGATCT GGCGATCGTC GCCTCGGGAC TCGGCGGCTC CCGACGGCAG 
GGAACCCAGC GAGCCGGGCG GACGATGCGC CCCGCCGGTG GTGCGCTCGT CTACGTGCTC 
GCGACGCGAG GGACCCGCGA GGAGGACTTC GCCCGCAAAC AGCTCCAGCA CCTCGGCCGC 
AAGGGGATGA CGATCCGCGA GCAGAACGTC GAACGCGACG AGGGTTCCGA AGCCGACGAC 
GCCGATGAAA CCGATGAAAA GGACGGAAAC GGCACAAGCG ACGGGGATGA CGAGATCGAC 
GGGAGCGTTG GCGACGAGTA G 

 

Protein sequence

MTDERASEAT GGESQRPEDP AADGDSDPTG DEQDDEQFTL ADFHDASQEA GRPVLTAAAL 
SRALDITQER ARKELEFLAD REAVQRLAVE TDPVVWYPSE LEDLTDRERV VVFPKRREII 
VDRPDQFTRA QLAQFAHLAD GNSEQGYRYV VRPEDIWQAP HDSWEALART MRQALGQRSE 
GLEEWVRSQW DRAHQFRLTT HEEGYTVLEA KSPEIMGNVA RQKLDEEHVH APISDTEDWV 
REGSEAAIKR ILYEAGYPVQ DHRELESGEE LPVDLEVRLR DYQRTWVDRF AEAGEGVFVG 
PPGSGKTVAA MGAMAHVDGE TLILVPSRDL ARQWADTILE YTSLEPEQIG QYHGGRKEVR 
PVTIATYQIA GMDRHRSLFD DREWGLVIFD ECQHVPSDVY RRSTHLQSKH RLGLSASPIR 
EDDRQQEIFT LVGPPIGTDW EALFEAGFVA EPELEIRYVP WGDDEQGNAY ASADGQEKYR 
IAAKNRGKVD EVRYLLSAHP DSKALVFVDY LEQGKDLSAA LDVPFLSGET PHHERRRLLD 
EFRRNERDLL IVSRVGDEGI DLPTADLAIV ASGLGGSRRQ GTQRAGRTMR PAGGALVYVL 
ATRGTREEDF ARKQLQHLGR KGMTIREQNV ERDEGSEADD ADETDEKDGN GTSDGDDEID 
GSVGDE