Gene Htur_4966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4966 
Symbol 
ID8745596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013746 
Strand+ 
Start bp135181 
End bp135858 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content56% 
IMG OID646515426 
ProductIntegrase catalytic region 
Protein accessionYP_003406373 
Protein GI284172992 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCG CAGACCTGCT CAGCGAGTGC TACGCGGCGA AATTTGATGA ATCTTGGGAG 
CGTGAGCGGA CGGCGACGCC CGTCAGGGTG TTCGCCGTCC GCCTCCACGC GACCGGTTGT 
TCGCTCCGAG AGACACAAGC GATTCTTCGC TTGATCGGCG TAGACCGCTC TCATCAAGCA 
ATCTGGCACT GGGTACATCG GCTAGCTGAT AACGTACCAG ACCCGCCGAC GGCGCAGCCG 
TCGCGGGTCG CCATTGATGA AACCGCTGTC AAGATCAACG GCGACTGGTC TTGGGTGTAC 
GCTGCAATAG ACCTAGACTC ACGACTAATT CTTGATGTCG CAGTGTTCGG ACGGCGAGGC 
ACCGATCCAG CCGCTGCGTT CCTGCATCGA TTGACCGAGA AACACAATCT CTCCGACGCT 
GTGTTTCTCG TCGATGGCTA CGGCTATCTG ACTGCCCTCT CTCGATTGGG GTTAAGCGGT 
CAACTCGACT ACGTCGAGCG AAACCTGATC GAAAAGTGGT TTCAGACCTT CAAGATGCGG 
GTTGACCGCT TCCATAATTC GTGGGTGGGC AGTCGGACGA GCGTCAGAGA ATGGCTTGAA 
CAGTACGTAC ACTACTATAA CACACAACGA CCGCATCAAT CACTCAACGG ACAGACGCCA 
GCCGAGGTGC TAAACTAG
 
Protein sequence
MTLADLLSEC YAAKFDESWE RERTATPVRV FAVRLHATGC SLRETQAILR LIGVDRSHQA 
IWHWVHRLAD NVPDPPTAQP SRVAIDETAV KINGDWSWVY AAIDLDSRLI LDVAVFGRRG 
TDPAAAFLHR LTEKHNLSDA VFLVDGYGYL TALSRLGLSG QLDYVERNLI EKWFQTFKMR 
VDRFHNSWVG SRTSVREWLE QYVHYYNTQR PHQSLNGQTP AEVLN