Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4924 |
Symbol | |
ID | 8745554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013746 |
Strand | + |
Start bp | 107529 |
End bp | 108317 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646515387 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_003406334 |
Protein GI | 284172953 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGCG AGGTTGCCGC TGCCAATGCT CTAGAGGAGT TGGGACTAAC CGAATACGAA GCACGGTGTT TTGTCGCACT CACCCGTATC TCACAGGGGA CCGCGAAAGA CATCAGCCAA GTTGCCGATG TCCCTCGATC GCGGGTTTAC GACACAGTTG ACCGACTCCA TAGAAGGGGA TTGGTAGATA TACAGCAGTC TGAGCCCCGA GAGTTTCGCG CAATCGCAAA AGAACAAGCA TTTGAGAAAT TACGTCAGGA CTACAACGCT AGTATTGATG CTGCCGATGA GGCGTTAGAC CAGGTTGAGT CGGCCAAGTC ACAGGAAAAG AAGGGTGTCT GGGCAATTGC GGATGCCGGA CATGTAGCCG ACAGAGTCAT AGATCTCATT GACAATGCAA ATGATCACAT CCATTTCATC ATTGCCGATG AGGAAATGCT TGAACAGTCT GCTCTTGATC AGTTGGCGGC AGCCAGCGAA CGCGGAGTCA CAATCCTTGT GGAAGCACCA TCAGACCTAG TACAAGACCG ATTTCAACAG GCTGTTCCAG ACGCCCACAT CGTTGTCCAA GAGAGCTTAC AAGAATCAAG AAAGGTCGTG AACAAATGGC CAGGACAGTT GGTGATGGCA GACCATCAAT CAATCCTGAT GAGCGGAGTT GAAGAGAATA GACTGCCAGG GGTTAACGAC GAGACTGCCA TGTGGAGCCA TGGACGCGAC CACGGTTTTG CCGCGTGGAT GCCGGAGTTA CTAGAAGACC GGGTAGATGA GAGTGAGAGT TCTGACTGA
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Protein sequence | MSSEVAAANA LEELGLTEYE ARCFVALTRI SQGTAKDISQ VADVPRSRVY DTVDRLHRRG LVDIQQSEPR EFRAIAKEQA FEKLRQDYNA SIDAADEALD QVESAKSQEK KGVWAIADAG HVADRVIDLI DNANDHIHFI IADEEMLEQS ALDQLAAASE RGVTILVEAP SDLVQDRFQQ AVPDAHIVVQ ESLQESRKVV NKWPGQLVMA DHQSILMSGV EENRLPGVND ETAMWSHGRD HGFAAWMPEL LEDRVDESES SD
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