| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4924 |
|---|
| Symbol | |
|---|
| ID | 8745554 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013746 |
|---|
| Strand | + |
|---|
| Start bp | 107529 |
|---|
| End bp | 108317 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 646515387 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_003406334 |
|---|
| Protein GI | 284172953 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1378] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGCG AGGTTGCCGC TGCCAATGCT CTAGAGGAGT TGGGACTAAC CGAATACGAA
GCACGGTGTT TTGTCGCACT CACCCGTATC TCACAGGGGA CCGCGAAAGA CATCAGCCAA
GTTGCCGATG TCCCTCGATC GCGGGTTTAC GACACAGTTG ACCGACTCCA TAGAAGGGGA
TTGGTAGATA TACAGCAGTC TGAGCCCCGA GAGTTTCGCG CAATCGCAAA AGAACAAGCA
TTTGAGAAAT TACGTCAGGA CTACAACGCT AGTATTGATG CTGCCGATGA GGCGTTAGAC
CAGGTTGAGT CGGCCAAGTC ACAGGAAAAG AAGGGTGTCT GGGCAATTGC GGATGCCGGA
CATGTAGCCG ACAGAGTCAT AGATCTCATT GACAATGCAA ATGATCACAT CCATTTCATC
ATTGCCGATG AGGAAATGCT TGAACAGTCT GCTCTTGATC AGTTGGCGGC AGCCAGCGAA
CGCGGAGTCA CAATCCTTGT GGAAGCACCA TCAGACCTAG TACAAGACCG ATTTCAACAG
GCTGTTCCAG ACGCCCACAT CGTTGTCCAA GAGAGCTTAC AAGAATCAAG AAAGGTCGTG
AACAAATGGC CAGGACAGTT GGTGATGGCA GACCATCAAT CAATCCTGAT GAGCGGAGTT
GAAGAGAATA GACTGCCAGG GGTTAACGAC GAGACTGCCA TGTGGAGCCA TGGACGCGAC
CACGGTTTTG CCGCGTGGAT GCCGGAGTTA CTAGAAGACC GGGTAGATGA GAGTGAGAGT
TCTGACTGA
|
|---|
| Protein sequence | MSSEVAAANA LEELGLTEYE ARCFVALTRI SQGTAKDISQ VADVPRSRVY DTVDRLHRRG
LVDIQQSEPR EFRAIAKEQA FEKLRQDYNA SIDAADEALD QVESAKSQEK KGVWAIADAG
HVADRVIDLI DNANDHIHFI IADEEMLEQS ALDQLAAASE RGVTILVEAP SDLVQDRFQQ
AVPDAHIVVQ ESLQESRKVV NKWPGQLVMA DHQSILMSGV EENRLPGVND ETAMWSHGRD
HGFAAWMPEL LEDRVDESES SD
|
|---|
| |