Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4896 |
Symbol | |
ID | 8745526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013746 |
Strand | - |
Start bp | 86734 |
End bp | 87525 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646515368 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_003406315 |
Protein GI | 284172934 |
COG category | [K] Transcription |
COG ID | [COG1378] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCAT TTGACGAAGA GCAGGCCGAA GCTGAGGCTC TCGACCGATT ACAAGATCTC GGGCTATCCC AATACGAAGC CCAGACGCTG ATCAACCTCT TTCGGCTCGG TACAGGAACC ACACAAGACA TTACCCGCAT CAACGGTGTC CCTCGCACTC GTGTGTACGA AGCGACTGAT CGGCTCCACG AACTGGGCTT CATCGACATC CAGCACACGA CGCCACGGAA ATTCACGGTA ATCTCGGAGG AGTCGATCAT CCGCATGCTC AACACCCAAC GTGAAAACAC AATCATTGAA CTTGCAGAGT GTTTAGAGGT GATCGGGCCG GCCCAACCAC AACGCGAACA GTTCGGCGTC TGGACGGTGA CCGGTCGGGA GGCGGTCGCG TCTCGTATTG ATGAGTTCAT CGGCGACGCA GACGAGCAAA TCGTCTATAT GACCGTCGAT GAGTTACTTA CCGACGAGCA TCTCGATCAG CTTCAGGCCG CCGAAGACCG TGGAGTAGAC ATCTACCTTG CAGGCATTTC AGACGATGTC CAAAATCAAA TTCAGAAAAT AGTACCGTCT GCCGAGCTGT TCGAAACGTT GTGGGAATGG CAGGATACGC CCGCTGGGAG CCTATTGATC ACTGACGAAG AGACGGCGCT CGTCAGTGCT CTCGTAAATG GTTCCGACGG CGCAAATGAG ATTGAAGAAA CGGCGATCTG GGGCGCAGGC GATCGAAATA GCCTCGTTGT CGTCCTCCGG ACGATCTTTA CATGGCGACT CAACGGAGAA CAAGCAGTGT GA
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Protein sequence | MVSFDEEQAE AEALDRLQDL GLSQYEAQTL INLFRLGTGT TQDITRINGV PRTRVYEATD RLHELGFIDI QHTTPRKFTV ISEESIIRML NTQRENTIIE LAECLEVIGP AQPQREQFGV WTVTGREAVA SRIDEFIGDA DEQIVYMTVD ELLTDEHLDQ LQAAEDRGVD IYLAGISDDV QNQIQKIVPS AELFETLWEW QDTPAGSLLI TDEETALVSA LVNGSDGANE IEETAIWGAG DRNSLVVVLR TIFTWRLNGE QAV
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