| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4872 |
|---|
| Symbol | |
|---|
| ID | 8745502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013746 |
|---|
| Strand | - |
|---|
| Start bp | 62761 |
|---|
| End bp | 63663 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646515352 |
|---|
| Product | pyridoxine biosynthesis protein |
|---|
| Protein accession | YP_003406299 |
|---|
| Protein GI | 284172918 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTG ACTTGGAGAG TCTCCAATAT GGAACTGACC TCATCAAACG TGGCTTTGCA
CAGATGCAAA AAGGCGGTGT CATTATGGAT GTCATCAATC CAGAGCAGGC TCGGATCGCC
GAGGACGCTG GTGCGGTCGC TGTCATGGCA CTAGAAGCAG TACCGGCAGA CATCCGCAAA
CGTGGCGGTG TTGCCCGGAT GGCTGACCCC GCAGACGTTG AAGAGATCGT CAACGAAGTA
TCGATTCCAG TGATGGGCAA GGCTCGTATC GGCCACAGAA AGGAAGCCCA GATCCTCGAG
GCCGTTGGTG TGGACATGGT TGACGAGAGC GAGGTACTCA CTCCCGCTGA TGACGCCTAC
CATATCGACA AGCGCGACTT TACGGTGCCG TTTGTCTGTG GCGCGCGCAA CCTCGGTGAG
GCGCTCCGGC GCATCGAGGA GGGCGCGGCG ATGATTCGCA CTAAGGGCGA AGCAGGCACT
GGTAACGTCA ACCAGGCCGT TCACCATCAG CGCCAGATTA AGGGTTCGAT CCGCAAATTG
GAAGGAATGA CCCACGAAGA GCGTGAAGCC TACGCCCGTG AGATTGAGGC GCCTATGGAA
CTAGTCCACG AGACCGCCGA CCGTGGTCGA CTGCCGGTCG TGAATTTCGC GGCAGGTGGC
ATCGCGACAC CAGCCGACGC CGCGCTCATG ATGTACCACG AATGCGATGG AATTTTCGTT
GGCAGCGGTA TCTTCGGTGC GGAGAACCCG TCCGCGATGG CTAAGGCGGT CGTCGAGGCA
ACGAATCACT GGAACGACCC TGAACAGCTC ACCAAGATTT CGAAGAACCT TGGCAAGGGG
ATGAAAGGTG ATGCGAACAT AGATCTCCCA GAAGAAGAAT ATTTCCAAGA CCGAGGGATA
TGA
|
|---|
| Protein sequence | MASDLESLQY GTDLIKRGFA QMQKGGVIMD VINPEQARIA EDAGAVAVMA LEAVPADIRK
RGGVARMADP ADVEEIVNEV SIPVMGKARI GHRKEAQILE AVGVDMVDES EVLTPADDAY
HIDKRDFTVP FVCGARNLGE ALRRIEEGAA MIRTKGEAGT GNVNQAVHHQ RQIKGSIRKL
EGMTHEEREA YAREIEAPME LVHETADRGR LPVVNFAAGG IATPADAALM MYHECDGIFV
GSGIFGAENP SAMAKAVVEA TNHWNDPEQL TKISKNLGKG MKGDANIDLP EEEYFQDRGI
|
|---|
| |