Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4863 |
Symbol | |
ID | 8745493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013746 |
Strand | - |
Start bp | 57916 |
End bp | 58593 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646515347 |
Product | Integrase catalytic region |
Protein accession | YP_003406294 |
Protein GI | 284172913 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTCG CAGACCTGCT CAGCGAGTGC TATGCGACGG AATTTGATGA AGCTTGGGAG CGTGAGCGGA CGGCGACGCC CGTCAGGGTG TTCGCCGTCC GCCTTCACGT GACCGGTTGT TCGCTTCGAG AGACACAAGC GATTCTTCGC TTGATCGGCG TCAAACGCTC TCATCAAGCA ATCTGGCACT GGGTACATCG GCTGGCTGAC AGCGTGTCAG ACCCGCCGAC GGCGCAGCCG TCGCGGGTCG CCATTGATGA AACCGCTGTC AAGATTAACG GCGACTGGTC TTGGGTGTAC GCTGCAATAG ACGTAGACAC TAGGCTTGTT CTCGATGTCG CAGTGTTCGG ACGACGAGGC ACCGATCCAG CCGCTGCGTT CCTGCATCGA TTGACCGAGA AACACAATCT CTCCGACACC ATGTTTCTCG TCGATGGCTA CGGCTATCTG ACTGCCCTCT CCCGATTAGG ATTGAGCGGT CAGCTCGACT ACGTTGATCG AAACTTAATC GAAACGTGGT TTCACACCTT CAAGATGCGA GTTGACCGCT TCCATAATTC GTGGGTGGGC AGTCGGGCGA GCGTCAGAGA GTGGCTTGAA CAGTTCGTAC ACTATTATAA CACACAACGA CCGCACCAGT CACTCAACGG ACAAACGCCA GCCGAGGTGC TAAACTAG
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Protein sequence | MMLADLLSEC YATEFDEAWE RERTATPVRV FAVRLHVTGC SLRETQAILR LIGVKRSHQA IWHWVHRLAD SVSDPPTAQP SRVAIDETAV KINGDWSWVY AAIDVDTRLV LDVAVFGRRG TDPAAAFLHR LTEKHNLSDT MFLVDGYGYL TALSRLGLSG QLDYVDRNLI ETWFHTFKMR VDRFHNSWVG SRASVREWLE QFVHYYNTQR PHQSLNGQTP AEVLN
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