Gene Htur_4849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4849 
Symbol 
ID8745479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013746 
Strand- 
Start bp45947 
End bp46615 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content51% 
IMG OID646515333 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003406280 
Protein GI284172899 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0189748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCG TTGGACGAGT AAAACTTGGA CTTCTGTATC TCCATGAGAC CTTTGAAGCA 
GTGCCGGACA TGAAACTTCA GCAGGAAGAG TTCCGCACGG TTTCTGGTGA ACCACGACTG 
ACAGTATGGG CATGGGGTGA TGATTTCGAC TCGTTCGAAA CTGCACTCAC TACTGATTCG 
ACAATTGCAG GCTACCAGCG CCTCAGCGAT CTCCACGAGA AACGATTGTA CCAGCTTATA 
TTTTTGAAGG GAAGAGAAAA GAAATATCTC TACCCAATTG CGTTAGAGCA AAATATCATG 
GCTATCCGCG TGATAATAAC GAGTGACGGG GCAAATCTTA TCCCCCGCTT CCCATCCCGT 
GAAGCGATAA CAGCCTACCA TGAAGCTTGT CAAGAGCGGG GTATATCATT TCAGTTACAG 
CAGTTATATC GGGAAAAACC CGACGACCCT TCCGAACAGT TCGGATTGAC CCCTGGACAG 
CGAGAGGTGC TCATTCGAGC GCACAAACGA GGGTACTTCA ATCAACCACG AAACGTCACA 
CTCGAAGAGT TAGCTGAGGG TATGGAGGTG TCCTCATCTG CGCTCGGACG CCGGATGCGG 
CGAGCGTTGG ATACGCTCAT CGACCAGACG GTTCGTTCAA ACCGTGACGG AAGCGACGAC 
GAATCGTAG
 
Protein sequence
MALVGRVKLG LLYLHETFEA VPDMKLQQEE FRTVSGEPRL TVWAWGDDFD SFETALTTDS 
TIAGYQRLSD LHEKRLYQLI FLKGREKKYL YPIALEQNIM AIRVIITSDG ANLIPRFPSR 
EAITAYHEAC QERGISFQLQ QLYREKPDDP SEQFGLTPGQ REVLIRAHKR GYFNQPRNVT 
LEELAEGMEV SSSALGRRMR RALDTLIDQT VRSNRDGSDD ES