| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4790 |
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| Symbol | |
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| ID | 8745380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | + |
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| Start bp | 412019 |
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| End bp | 413644 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646515288 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003406235 |
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| Protein GI | 284172853 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0680897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGGAA TCGCCGGCCA ACGGCGACCC GCCGACGACG CAACGTTTAT TTCCGTACTC
CGAAATACCC AGACGATGGC AGCACCTGAA ACGGACGGAT TCGATATCCG CGAGTACGGC
GCGACCGGCG ACTCGGACGC GCTCGATACC GAGGCGATCC AGACGGCGCT CGACGAGTGC
GCCGAGTCCG GCGGGACGGT GTACGTCCCG TCGGGCACGT ACGTGACCGG CCCGCTCCGG
GTCGGCGACC AGACGACCCT GCATCTGGAC GCGGGGGCGA CGCTCCAGTT CGTCGGCGAC
TACGAGGCAT TCCCGACGGT CCAGAGCCGC TGGGAGGGGT GGAACCAGTA CGGCTTCCAC
CCGTGTCTGC TCGTCGACGA CGCCGAGAAC GTCTCGATCA CCGGCCGCGG GACGATCGAC
GGCGGCGGCG AGTACTGGTG GCAGTTCTAC GACGCCCCCG AGTCGGAGAT CCCAGACGGA
CTCCAGGAGC GACTGGCCGA GTTCGAGGAG AAAAACGAGA AACAGGACGA CGTCAGCAGC
TTCACCCACC GGCCGCCGCT GTTCCAGATC TCCGAGTCGG AGAACGTCAG CGTGTCCGGC
GTGACCCTCG AGAACTCGCC GTTCTGGAAC ACTCACGTCG TCTACTCCGA GAACGTCACG
ATCACCGACG TCAACATCGC GAACCCGGCC GACGCGCCTA ACGGAGACGG GATCGACATC
GATTCCTCGC GGTACGTCCG CATCAGTGAC ACCTACATCA ACGCGGGCGA CGACGCGATC
TGTATCAAGT CCGGGAAGAA CGCCGAGGGC CGCGAGGTCG GCGAACCGGC GTCCCAGATC
ACCGTCACCA ACTGTACGGT CGAGGCCGGT CACGGCGGCG TCGTCATCGG TAGCGAGATG
TCCGGCGACG TGCGGGACGT GACGGTTTCT AACTGCACCT TCACCGACAC CGATCGAGGG
GTCCGGATCA AGACCGCTCG CGATCGCGGC GGCGTCGTCG AGGACCTCCG GTTCGACAAC
ATCGTCATGC GACGGATCGC CTGCCCGTTC ACCATCAACG GCTACTACTT CATGCCCCTC
GACAGCGATT CCGAACCGGT CGACGAGGGG ACGCCGATGG TGCGGAACGT CTCCTTTACC
AACATCACTG CCCGTCAGGT CGAGACCGCC GGCTTCTTCG CCGGCCTCCC CGAGCAGTAC
TTCGAGGGAA TTTCGTTCAA CGACGTGCAG ATCGACGCCA CCCGGCCGCT CGACGCGACG
GACCTCGATC CCGCGATGGC CTACGACTAC GAGCAGACCC ACGCCCTCTT CTGTAAGTCC
ATCGCCGACA TCTCGTTCAC CGACGTCCGG ATCCGGACGC CCGGCGGCCC GGCGATGCAG
TTCGAGGACA CCGAGGACGT GACGATCGAC GGCCTGCGGG TCCCCGACGA CCAGGACGCG
CCCGTGGTCT CCCTGACGAA CGTCGATCGG ACTCGAGTCC GCGGCTGTGC GCCCCAGTCG
GAGGGACCGT TCCTCGAGGC CGGCGGGTCG GAAACGCGCG AAATTTCGTT CGCCGGTAAC
CACGGATCGC TGGCCGACGA CACCGAAATC GCCGACGACA GTGACGCGAC GATCGACCGC
TCCTGA
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| Protein sequence | MSGIAGQRRP ADDATFISVL RNTQTMAAPE TDGFDIREYG ATGDSDALDT EAIQTALDEC
AESGGTVYVP SGTYVTGPLR VGDQTTLHLD AGATLQFVGD YEAFPTVQSR WEGWNQYGFH
PCLLVDDAEN VSITGRGTID GGGEYWWQFY DAPESEIPDG LQERLAEFEE KNEKQDDVSS
FTHRPPLFQI SESENVSVSG VTLENSPFWN THVVYSENVT ITDVNIANPA DAPNGDGIDI
DSSRYVRISD TYINAGDDAI CIKSGKNAEG REVGEPASQI TVTNCTVEAG HGGVVIGSEM
SGDVRDVTVS NCTFTDTDRG VRIKTARDRG GVVEDLRFDN IVMRRIACPF TINGYYFMPL
DSDSEPVDEG TPMVRNVSFT NITARQVETA GFFAGLPEQY FEGISFNDVQ IDATRPLDAT
DLDPAMAYDY EQTHALFCKS IADISFTDVR IRTPGGPAMQ FEDTEDVTID GLRVPDDQDA
PVVSLTNVDR TRVRGCAPQS EGPFLEAGGS ETREISFAGN HGSLADDTEI ADDSDATIDR
S
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