| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4784 |
|---|
| Symbol | |
|---|
| ID | 8745374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | - |
|---|
| Start bp | 400704 |
|---|
| End bp | 401477 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646515282 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003406229 |
|---|
| Protein GI | 284172847 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.820047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACG CCCCCAACGA ACGCACCGGA CGCCGGATCC AATCAGTCGA AATCGCCTTT
ACCGTTCTCG ATGCCGTCCG GAAGAACGAC CGGCCCAGCG TGACCGAACT CGCCGACGAA
CTCGGCCACT CGAAGAGCAC GATCCACAGC CACCTCCAGA CCCTCGAGAG CGAGGAGATC
ATCGTCCGCG AGGACGACGG CTACCGGCTG AGTCTCCAGG TGCTGGACAT GGCAAACGAC
GTCCGCACTC AGGTCGCCAA CTACGACGTG ATCGTCGACG CGGTCGACGA ACTGGCGAAC
GAAACGGGAG AGATCGCGCA GTTCGGGATC GAAGAACACG GGCACGTGTC GTATCTCTAC
AAGGCGATGG GGAATCAGGC CGTCGAGACG GCCTCGCGCG CCGGCGGGAA ACAGCCGATG
TACTCGACCT CGCTCGGCAA GGCCATCCTC GCGTTTCTCC CCTCCGACAG ACAGGAGGAA
CTCGTCAGCG AGGCGGCGTT CGAACGGAGA GGGCCGAAAA CGATCACGGA TCGGGCCGGC
CTCTACGAGG AACTCGAGGC GACCGCGAAA CGGGGGTACG CGATCGACGA CGAGGAGAAC
ATCGAGGGAC TCCGGTGTGT CGCCGCGCCC ATTCGGAACG GGACGTCGGT CGTCGGCGCC
GTCAGCGTCA CCGGACCGGC CAGTCGGTTC ACGGACGACT ACCTCCACGG CGAACTCGCC
GAGAGCGTCC AGCGGGCGGC GAACGTCATC GAACTCAATA CCAAGTTCTC GTAG
|
|---|
| Protein sequence | MANAPNERTG RRIQSVEIAF TVLDAVRKND RPSVTELADE LGHSKSTIHS HLQTLESEEI
IVREDDGYRL SLQVLDMAND VRTQVANYDV IVDAVDELAN ETGEIAQFGI EEHGHVSYLY
KAMGNQAVET ASRAGGKQPM YSTSLGKAIL AFLPSDRQEE LVSEAAFERR GPKTITDRAG
LYEELEATAK RGYAIDDEEN IEGLRCVAAP IRNGTSVVGA VSVTGPASRF TDDYLHGELA
ESVQRAANVI ELNTKFS
|
|---|
| |