| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4783 |
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| Symbol | |
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| ID | 8745373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | - |
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| Start bp | 398391 |
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| End bp | 400496 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646515281 |
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| Product | hypothetical protein |
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| Protein accession | YP_003406228 |
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| Protein GI | 284172846 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3866] Pectate lyase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.292143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACACA AACGACGATC CTTCCTGCGA GCGATCGGTG CGGGGAGCCT CGGACTGACG
GCAGCAGCGG TTACCAGTGG CACGGCCGCG GCGGCGACCA TCATCACGAT TCGCGGCGGT
GGTGCGGACA TCTGGAGTAC GGCGGACGCG TTCCACTACT ACTACGACAA CGTCAGCGGA
GACTTCGACG TACAAGTGCG AAACACCGCG CTCGAGAACA CTGACCCCAA CGCGAAGACC
GGCATCATGA TCCGGGAGTC ACTGGATCCC ACGGTGAAGA ACGTGATGCT CCGGCGGACG
CCCAGCGGCG AGGCGTCGCT CCAGTGGCGG CCGGAAGCCG GCGTCGATAC GGTCAGCACG
ACGTCGGGCG GCGAAGACGA GAGCGAAGTC GACGGTGGGA GCCTCGAGGC CGAGTGGCTG
CGCCTGAAGC GGAGCGGCGA CGTCTTCGAG GCGTACGGCT CGAATGACGG GGAGAGCTGG
ACGCTGATCG CCGATATCGA CGCGGAACAC GTCGAATTGA GCGACGACGC GTACGTCGGC
CTCCCCGTGA CGAGCCACAA CGTCGGCACG CTCTGTACGG CCGAACTACG CGATCTGACG
GGACTCGAAC CGACCGCCAA CCGCGATATC GGCGACGTCG ACGTCGCCGG AAGCGTCGAC
GTTGAAGAGG GCGTCCCGTT CGTCTCGACC GGCGATGCGA CCGACGTGAC GGCCACGGGG
GCGACGGTAC GCGGCGAACT GACCGATCTG GGCGGCGCCG AGTCGGCCGA CTGCTACGTC
GAGTATCGGG AGGTTCCGAC CGAGTCCTGG GCGACGACCG CCGCGGGAAC GCTCGAGGAG
ACGGGGGCGT TCGGCGTCCG CCTCGACGGC CTCACGAGCA GGCGGTACTA CGAGTACCGC
GCGGTCATCG AGACGAGCGA CGGGGATTGG GCGACCGGGT CGACCAGAAC GGTCGGGACG
CCCGGTCGGT CGAACGGCCG GACGGTTCGA AACGGGCCAC GAAGCGCATC ATACGTCGAC
CTCGCCGACG GGTTCGCGGA TCCGGCGCCG TGGCTGGACG ACGACACGCC CGTCATCAAG
ATCACCGAGC CGACGCGACG CCAGCTGTCG GCCGCGGTCG GGGTCGACGG GCCGCGTCTG
GTCGTCTTCG AGACCAGCGG TGTGATCGAT CTCGAGGAGC AGCGCCTGAC GGTGGTCAAC
GATGAACTCT ACCTCGCGGG ACAGACGGCC CCGTCGCCGG GGATCACGCT CACGCGCGGC
GATCTCTGGA TCGACGCGGA CGATTGCGTC GTCCAGCACC TGCGGGTCCG GCCCGGCGAC
GCCAACCTGA CCGAGGAGAG CGACTGGGAA CCCGACGGGA TCAGAACGGG AGACGGGACC
GAGAACAACG TCATCGACCA CTGCACGGCG ACGTGGGGGG TCGACGAGAA CCTCTCGGTC
GGCTACGACA CCGAAAACAC GACGGTCTCG AACTGCCTGA TCGCCGAGCC GCTGCAGGAC
GCGACCCATC ACAAGGGCGA TCACGGCTAC GGTTCGCTGA TCGGTAACAA CGCGGAAAAC
GTCGCGCTCG CGGGCAACGT CTGGGCGCAC AACTACGATC GGAACCCGCG CCTCAAGGAG
GGGACCAGAA CCGTCGTTTC GAACAACGTT ATGTATCACT ACAGGGACGG GGCCTGGATG
GATCCCGACA CGGAGGCGAG CATCGAAGGC AACGTCTTCC GGCGACCGGT CAGCGACCAG
CCCAACGTCT TCGGCGACGG CGACGCGTAC GTCGCCGACA ACGTCCTCGA GGGCGGCGAC
AATCCGATGG TCGGCGACGG AATCACGCGA CTCGACTCGC GGCCGCTCTG GCCCGAGGAC
CTCGAGGTCT TCGACTCGGA GGACGTCGTC GAACACAACC TCGAGAACGT CGGCGCGCGG
CCGGCCGACC GAACCGCTCA CGACGAGCGC GTCCTCGAGC AGCTCCGTAC CGGTGACGGC
ACGTACATCG ACAGCCAGGA AGAGGTCGGC GGTTACCCCG ACCTCGAGGT CAACCGGCGG
CGGCTGGACG TCCCCCAGAA CGGAACGCAC GCCTGGCTTC GCGCGAAAGC TCGCAGCGTC
GAATAG
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| Protein sequence | MAHKRRSFLR AIGAGSLGLT AAAVTSGTAA AATIITIRGG GADIWSTADA FHYYYDNVSG
DFDVQVRNTA LENTDPNAKT GIMIRESLDP TVKNVMLRRT PSGEASLQWR PEAGVDTVST
TSGGEDESEV DGGSLEAEWL RLKRSGDVFE AYGSNDGESW TLIADIDAEH VELSDDAYVG
LPVTSHNVGT LCTAELRDLT GLEPTANRDI GDVDVAGSVD VEEGVPFVST GDATDVTATG
ATVRGELTDL GGAESADCYV EYREVPTESW ATTAAGTLEE TGAFGVRLDG LTSRRYYEYR
AVIETSDGDW ATGSTRTVGT PGRSNGRTVR NGPRSASYVD LADGFADPAP WLDDDTPVIK
ITEPTRRQLS AAVGVDGPRL VVFETSGVID LEEQRLTVVN DELYLAGQTA PSPGITLTRG
DLWIDADDCV VQHLRVRPGD ANLTEESDWE PDGIRTGDGT ENNVIDHCTA TWGVDENLSV
GYDTENTTVS NCLIAEPLQD ATHHKGDHGY GSLIGNNAEN VALAGNVWAH NYDRNPRLKE
GTRTVVSNNV MYHYRDGAWM DPDTEASIEG NVFRRPVSDQ PNVFGDGDAY VADNVLEGGD
NPMVGDGITR LDSRPLWPED LEVFDSEDVV EHNLENVGAR PADRTAHDER VLEQLRTGDG
TYIDSQEEVG GYPDLEVNRR RLDVPQNGTH AWLRAKARSV E
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