Gene Htur_4758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4758 
Symbol 
ID8745348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013745 
Strand- 
Start bp371322 
End bp372266 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content51% 
IMG OID646515256 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_003406203 
Protein GI284172821 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATCCG ATAACACGAG AACAGATCGT AGATCGATAC TCAGGGCATG TAGTATCGGA 
GCGACGGTAG GTCTGACAAC GACAGCAGGA TGTCTCGGAA CTGATGATGA AATCGCCGTA 
GCTTCCATGA AGTGGAGCGA GGCTCGGCTC ATGGGATATC TGGGATACGA AATGCTCAAG 
GAAAACACGG ACACCAGCGT CGGAGACGAG ACCAGTCTAG GAGGTTCGAG ACAATGTTTC 
GAGGCCGTGA AAAACGGAGG AATCGACCTC TATCACATCT ATACTGGCGG CGCGTGGTCA 
GAGCTTCCAC CGCAGCGCGA GGAGCTAATT TCCGATCCGG ACGAACTCTA TGAGCAAGTG 
AAAGATGATA TGGAAGAAGA ACACGGGCTG GCCTACCTCG AGCCCGCCGC ATTCAACAAC 
ACGTACGCAA TCGGTGCTAG CCCGGAGTGG GCCGACGAAA CGGGTATAGA GACACTGAGC 
GGGTTTGTTG ACTACATCGA AAACGGAAAT ACCGATGTTT CGATCGTTCT TGGACCGGAA 
TTCCAAGAAC GGTCCGACGG CTGGCCTGGA TTGGTTGAAC ATTATGGTAT TGAAGAATCC 
GCGAAGGAAC TCGACATCCA GAGCGTCCAA GCCGATCTTA CGTACGAGAT TCTCGGCGAA 
AACGAGGCGG ATCTCGGAAT GGTGTTCAGC ACGAATCCAA ACATTCAGCA GTTCGATCTT 
ACAATTCTAG AAGATGACGA GGAATTCTTC TTGCCGTATA ATCCGGCCCC ATTGGTAAAG 
AAAGAAACAG TTGAAGAATA TGATATCGAG GATCCCCTCA ACAAAGCCTC ACAGTCGCTA 
ACATCCGAAG AAGAGGTTCG GAAGCTGAAC AGTCGGATCG ACCTGGAAGG AGAGGATCCA 
CAGGACGTGG CCAGAGATCA CCTGAAAGAG AACGGCCTAA TTTGA
 
Protein sequence
MRSDNTRTDR RSILRACSIG ATVGLTTTAG CLGTDDEIAV ASMKWSEARL MGYLGYEMLK 
ENTDTSVGDE TSLGGSRQCF EAVKNGGIDL YHIYTGGAWS ELPPQREELI SDPDELYEQV 
KDDMEEEHGL AYLEPAAFNN TYAIGASPEW ADETGIETLS GFVDYIENGN TDVSIVLGPE 
FQERSDGWPG LVEHYGIEES AKELDIQSVQ ADLTYEILGE NEADLGMVFS TNPNIQQFDL 
TILEDDEEFF LPYNPAPLVK KETVEEYDIE DPLNKASQSL TSEEEVRKLN SRIDLEGEDP 
QDVARDHLKE NGLI