| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4686 |
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| Symbol | |
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| ID | 8745282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | - |
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| Start bp | 272743 |
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| End bp | 273543 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646515190 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003406137 |
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| Protein GI | 284172755 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.914766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTCT ACGGTATCAT CGGAAACCCC GTCGAGCACT CACTGTCGCC GCCGATGCAC
GAAGCCGCCT TCCGCGAGCG CGGAATCGAC GCCAAGTACG TCACCTTCGA GGCCGATCCT
GATCGGATCG AAGAGGCGTT TCGCGGCGCG GAAGCGCTCG GTGTCGACGG TCTGACCGTC
ACGCTGCCGT TCAAACACGA CGCCTTCGAG TTCGCCGAGC CGGACGAGCA GATCCAACGG
GTCGGGGCGG TCAACACGAT CGATTTCACT GAGAACGGGC CCGTGGGATA CAACACCGAC
ATGACCGGGA CCCTCCGTGC CTTCGAGCAC CACGGTGTGG ATCTCGAAGA CACTCGCGCG
GTCGTCGTCG GCGCCGGCGG CGCCGCCCGG GCGCTGGCCT TCGGATTCGA GGACGCGGGT
GCTGACGTAC AGATCGCCAA TCGGACGGCG TCCAAGGCTC ACGACCTCGC CGACGAGGTC
CCGGGGGCGA CCGGTCACGG GCTCGAGGCC CTTCCCGACC TGATGGCCGA CGCCGACGTC
GTCGCCAACG CGACCAGCGT CGGGCTGGAG TCCGACGAGT CGGTCGCGCC GGCCGACGCC
TGGCACGGGG ACCTCGTGGC ATTCGACGCG GTGTACAAGC CGCTCGAGAC GCGGTTCTTG
AAGGACGCGG CAGCCACTGG CGCCCAGACG ATTGACGGCG CCTGGATGCT GCTGTTCCAG
GGCGTCGACG CCTTCGAGAC GTGGACGGGC GAGGACGCAC CGGTCGAGAC GATGAACGAG
GTGCTGCGCA GTCACCTGTA A
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| Protein sequence | MDVYGIIGNP VEHSLSPPMH EAAFRERGID AKYVTFEADP DRIEEAFRGA EALGVDGLTV
TLPFKHDAFE FAEPDEQIQR VGAVNTIDFT ENGPVGYNTD MTGTLRAFEH HGVDLEDTRA
VVVGAGGAAR ALAFGFEDAG ADVQIANRTA SKAHDLADEV PGATGHGLEA LPDLMADADV
VANATSVGLE SDESVAPADA WHGDLVAFDA VYKPLETRFL KDAAATGAQT IDGAWMLLFQ
GVDAFETWTG EDAPVETMNE VLRSHL
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