| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4637 |
|---|
| Symbol | |
|---|
| ID | 8745241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | - |
|---|
| Start bp | 217459 |
|---|
| End bp | 218289 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646515149 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_003406096 |
|---|
| Protein GI | 284172714 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCTC AACTCGCCCG CTTCACCGAC CGATGCGTCG ATTTGTCCCA GAATGCTGTC
ATCGGCAAGC CAGCGTCGGC GATCAAGAAG GGTGACGGCG GCTACGCTGA CTGGGTGATT
ATCTCGATCC ACTGCCTCCG AGAGTACCTG AACCAACCAT ACCGTCGGTT GCTCGATATC
CTGTACGAGA TGCCGGGAAT CGCGGCGAAA CTCGGACTTT CTGTGGATCA GCTACCGGAT
TTCACCACCG TCTGTACGCG GAAACAAGAT CTCAAAATGC GGATCTGGCG GGTGTTACTG
CGGCTGTCTG TCTCGCTACA CGAGCTCGGC GATGTTCAGG CGATCGACGC GACCGGCTTC
AAACGCCATC AAGCTAGCCG CCACTACGTC CTCCGCGTCG GCTACAACTT TGATGATATC
AAGACGACAG CGCTCGTCGA TTGCGATACT AGCGTCATCC TCGATATCCA TTGCTCGATG
AAACAGCCGC ACGATACACA CGTTGGACGA CAGGTACTGA TGAGAAATCT AGCACAGCTA
ACCACGATCA CTGCTGACAA AAGTTACGAC TGGGACGTGC TGCGGCACGA GCTCAGGGAT
ATTGGCATCC GCCCGGTGAT CAAACATCGA GAGTTCTATG CACTTGACAA AGCGCACAAC
GCTCGCCACG ACGAGAACGT CTATCACCGC CGCTCGATCG TCGAAGCGAT CTTCTTCGCG
CTGAAGCATC GATTCGGCGA GACGTTGCGG GCCAGAACGT GGTTTGGCCA GTTCAGAGAG
CTCGTCCTAA AGGCTGCCGT CAGAAACATC GAGCAAGCCG TGAAGCTCTG A
|
|---|
| Protein sequence | MPSQLARFTD RCVDLSQNAV IGKPASAIKK GDGGYADWVI ISIHCLREYL NQPYRRLLDI
LYEMPGIAAK LGLSVDQLPD FTTVCTRKQD LKMRIWRVLL RLSVSLHELG DVQAIDATGF
KRHQASRHYV LRVGYNFDDI KTTALVDCDT SVILDIHCSM KQPHDTHVGR QVLMRNLAQL
TTITADKSYD WDVLRHELRD IGIRPVIKHR EFYALDKAHN ARHDENVYHR RSIVEAIFFA
LKHRFGETLR ARTWFGQFRE LVLKAAVRNI EQAVKL
|
|---|
| |