Gene Htur_4634 details

Gene Information

• Locus tag: Htur_4634
• ID: 8745238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013745
• Strand: +
• Start bp: 215331
• End bp: 216008
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 646515146
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003406093
• Protein GI: 284172711
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGTCA CGACGGAGTT CCGACTTCGT TCATCCGCTC TCCCGCTCGT CAGTATTCCG 
GCGTCGCTCC CGCCCGACGA GATCGAGTGC TCCCACGCCC TTTGTCTCGA GCCTGACGCG 
CGGGTGTTCC ACGTTGAGAT CGACGCCGAG TACGATGTCT CCGAAGCGCA ACTTGCAGCG 
CTCGACGAAG TTGTCACGGT GACGCCGCTC GGAGAACGAG CCGACACGAC CATCTTTAAG 
CTCACGGTCG AATTAGACGA CTCGATCGCC CCGGCCTTCG ACCCTGAGCG CTTCGATGGT 
GCAAAGATGA AATCCACGAC CATCACGTCG GACGGGTGGT ACGAAACGAA GGAATTCAAA 
GACTACGAGA CGTTCCACGA CTTCCACACC ACGTTCGAGG ATCACAGCAT CTCACTGGAA 
CTCATCTCCA TCACATCCAA CCAATCCTCG TTCAACGACT CCACAGGAGA TGGTCTCACT 
GACCGGCAAC GGGAGGCCCT GGAACTCGCA GTCTCTCGTG GCTACTATGA GAGCCCGCGC 
AAAGTTACGG CTGCGGAACT CGCCGAGGAA TTAGGTATCT CTCAACCGTC CCTGTCGAGT 
CTCCTCCGGC GTGGCGAGCG CCAGATCCTC ACCTCCTCGC TCGACGTACA GGGGTACTTA 
AACACCGCTT CTAAATAG 

 

Protein sequence

MTVTTEFRLR SSALPLVSIP ASLPPDEIEC SHALCLEPDA RVFHVEIDAE YDVSEAQLAA 
LDEVVTVTPL GERADTTIFK LTVELDDSIA PAFDPERFDG AKMKSTTITS DGWYETKEFK 
DYETFHDFHT TFEDHSISLE LISITSNQSS FNDSTGDGLT DRQREALELA VSRGYYESPR 
KVTAAELAEE LGISQPSLSS LLRRGERQIL TSSLDVQGYL NTASK