Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Htur_4496 |
Symbol | |
ID | 8745125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haloterrigena turkmenica DSM 5511 |
Kingdom | Archaea |
Replicon accession | NC_013745 |
Strand | + |
Start bp | 95195 |
End bp | 96706 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646515033 |
Product | glycoside hydrolase family 43 |
Protein accession | YP_003405980 |
Protein GI | 284172598 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0241272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGATA GTCATGATCA CACAGGGTTG AATCGGCGAA GCGTACTGAA GACGATCGGC GCCGGCGCGC TCGGTGCGGG CGTCATCGCG ACGAGCGGGA CGACGGTCGC CGACGAGAGT TCGACGCATT ACCACAATCC GGTCGGACCG GTCGGGTTCG GAGACGTAAC CGTCATTCAG GCCGGCGACG GAACCTACTA CGCGTACGGA ACCGAGACGC CGGAGGACAT CGTTCCGATC GCGACCTCGG ACGATCTGGT AGACTGGACG TACATCGACT CGGCGTTCGA CAGCTACCCC GACTGGCGGG ACGATCCGGA CGCCGGGGTC TGGGCGCCCG ACATCAACTA CTACAACGGC CAGTACTACC TCTATTACTC CTACTCGACG TGGGGGAGCC AGGACAATCC GGGGATCGGC GTCGCGCTCT CGGACACACC GGACGGTCCG TTCGAGGATC AGGGGCCGGT GTTCAGGGCC GAAGACCTCG GGATGACCAA CTGCATCGAC TCGGAGTTCC GCGTCGTCGA CGGCACTCCC TACATGATCT GGGGGAGTTT CTACGGGTTC TACGGCGTCG AACTCACGAG CGACGGGATG GACTACGTCC CGGATACGAC GTTCCACTTG GCGGGTGACA ATCGCGAAGG CCCGATGGTC ATCGAAGAGA ACGGCTACTA CTACCTGTTC TACTCGACTG GCCACTGCTG TGAGGGGTAC GACAGCACCT ACGAGGTCGA AGTCGGCCGC TCCGAATCGT TCTTCGGCCC CTACTACAAC CAGAACGGGA CCGACCTGCG CGACCTGAAC GAGCACCGCA GCGGCGTGTC GGTCCTCAAC GGGACGGACG AGTTCACCGG TCCGGGTCAC AACACCGCGA TCCAGGACGA GAACGGCGAC TGGTGGATGC TCTACCACGT CGAGGCCACG GCGGACCAGG AGACCCGCAT CATGATGATC GATCGAATCC AGTGGGAGAA CGGCTGGCCG GTCGTCGCCT GTGACGGGAC GCCGAGCACG CAGAGCCCGA TGCCGAACAC CGGCAGCTAC GACTGCGGCG CCGTCACCAG CGGTATCGGC ATCAGCGAGG GGACCTACGC GATCACGAAC GTCAACAGCG GCAAGCGCCT CGAGGTCGCC AGCGCCGGAA CGAGTGACGG CGACAACGTT CAGCAGTACA GCGATACGGG ACACGCCTGC CAGCAGTGGG ACGTAATCGA GACGGACGAC CACGAGACGT TCCACCTTCG AAACGTCAAC AGCGGGAAGC TCATGGAGGT GGCCGGCGCC GACACGAGCG ACGGAGCGAC CGTCCAGCAG TACGCCGACA CCGGGCACGC GACCCAAGAC TGGCACATCG TCGACAACGG TGACGGTACC TACCGCATCG AGAACGCCAA CAGCGGCAAG GTCGCCGAGG TCAACGGTGC GTCGACGGAC GACGGTGCCG ACGTCATCCA GTGGTCGTGG AACGGCGGCG CGAACCAGCG GTGGACGTTC GATCTGGTGT AA
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Protein sequence | MVDSHDHTGL NRRSVLKTIG AGALGAGVIA TSGTTVADES STHYHNPVGP VGFGDVTVIQ AGDGTYYAYG TETPEDIVPI ATSDDLVDWT YIDSAFDSYP DWRDDPDAGV WAPDINYYNG QYYLYYSYST WGSQDNPGIG VALSDTPDGP FEDQGPVFRA EDLGMTNCID SEFRVVDGTP YMIWGSFYGF YGVELTSDGM DYVPDTTFHL AGDNREGPMV IEENGYYYLF YSTGHCCEGY DSTYEVEVGR SESFFGPYYN QNGTDLRDLN EHRSGVSVLN GTDEFTGPGH NTAIQDENGD WWMLYHVEAT ADQETRIMMI DRIQWENGWP VVACDGTPST QSPMPNTGSY DCGAVTSGIG ISEGTYAITN VNSGKRLEVA SAGTSDGDNV QQYSDTGHAC QQWDVIETDD HETFHLRNVN SGKLMEVAGA DTSDGATVQQ YADTGHATQD WHIVDNGDGT YRIENANSGK VAEVNGASTD DGADVIQWSW NGGANQRWTF DLV
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