| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4484 |
|---|
| Symbol | |
|---|
| ID | 8745113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | + |
|---|
| Start bp | 76912 |
|---|
| End bp | 78231 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646515021 |
|---|
| Product | glycoside hydrolase family 4 |
|---|
| Protein accession | YP_003405968 |
|---|
| Protein GI | 284172586 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0542529 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA TCACTTTCAT CGGAGCCGGG AGTGTCGTGT TCGCGAAGAA CCTGATGACG
GATATCTTTT CGTTCGAGCG CCTGCGAGAC AGCACGATCA CGCTGATGGA TATCGATCCG
CAGCGGTTGG ATCGGGCCGC CGAGATCGGC GAGGCCATCG TCGATTCCCA CGATCTCCCG
GGGGAGATCC GCGCGACGAC CGATAGGCGC GAGGCCCTCG AGGGCACTGA CTACGTCTTC
AACATGATCA ACGTCGGCGG CGAAGCGCCG TTCGAGAACG AGATCCGAAT TCCCGAGGAG
TACGGGGTCA AGCAGGCTGT CGGCGACACG CTCGGTCCCG GCGGCGTCTT CCGGGCGCTG
CGAACCGCCC CGACGGTGCT CGATATCGCC CGCGATATGG AGGAACTGTG TCCCGACGCG
CTCCTGTTGA ACTACACGAA CCCGATGGCG ATCCTCTGTT GGGCGGTCGA CGAGGCGACC
GATATCGACG TGGTGGGACT CTGTCACAGC GTCCAGCACA CGACCGCGGC CATCGGCCGG
TATCTCGACG TCCCCAGCGA AGAGCTCCAG CACTGGGTCG CCGGCATCAA CCACATGGCG
TGGTACCTCG AGCTAGAACA CGACGGTCAG GACTGTTACC CGGCCCTGCG CGACGCCGCG
GACGATCCCG ACGTCTACGC GCAGGATCCG GTCCGGTTCG ACGTGATGGA CCACTTCGGG
GCGTTCATCA CGGAATCGAG CCACCACCTG AGCGAGTACC TCCCGTACTT CCGGACGGAC
CAGGACGTCA TCGACGACCT GACCCCCGAG GAAGACTTTG GCCACTACAC GATCGAGTGG
ATGCCGACGG GACGGTATCT CGAACACTGG CGCTCCTACC AGCCGGATCT CGAGGGCGAG
GTCGAGATCA CCGAGGACGA CGTCTCGCTC GAGCGCTCTC CCGAGTACGG CTCTCGGATC
GTCCACTCGA TCGAGACGGA CGAGGTGCGG CGCATGAATC TCAACGTTCG GAACGACACC
GGCGCGATTT CGAACCTTCC GGACGACTCG TGCGTCGAGG TGCCGTGTCT GATCGACGGA
CGGGGGATTC ACCCCTGTTC CGTCGGTGAC CTGCCGTCCC AGCTCGCGGC GCTGAACCGG
ACGAATATCG GCGTTCAGGA ACGCGCGGTG ACCGCGATAC TCGAGCAAGA CGAAACCGCG
CTTCGCCAGG CGGTGAAACT CGATCCGCTC ACCGCGGCCG AACTCGATCT CGAGACGATT
GACGAGATGG TCGACGACCT GCTGGCCGTG AACGCCGAGT ATCTGCCCGA ACTGGACTGA
|
|---|
| Protein sequence | MADITFIGAG SVVFAKNLMT DIFSFERLRD STITLMDIDP QRLDRAAEIG EAIVDSHDLP
GEIRATTDRR EALEGTDYVF NMINVGGEAP FENEIRIPEE YGVKQAVGDT LGPGGVFRAL
RTAPTVLDIA RDMEELCPDA LLLNYTNPMA ILCWAVDEAT DIDVVGLCHS VQHTTAAIGR
YLDVPSEELQ HWVAGINHMA WYLELEHDGQ DCYPALRDAA DDPDVYAQDP VRFDVMDHFG
AFITESSHHL SEYLPYFRTD QDVIDDLTPE EDFGHYTIEW MPTGRYLEHW RSYQPDLEGE
VEITEDDVSL ERSPEYGSRI VHSIETDEVR RMNLNVRNDT GAISNLPDDS CVEVPCLIDG
RGIHPCSVGD LPSQLAALNR TNIGVQERAV TAILEQDETA LRQAVKLDPL TAAELDLETI
DEMVDDLLAV NAEYLPELD
|
|---|
| |