Gene Htur_4471 details

Gene Information

• Locus tag: Htur_4471
• ID: 8745100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013745
• Strand: +
• Start bp: 61033
• End bp: 62922
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 646515008
• Product: ABC transporter related protein
• Protein accession: YP_003405955
• Protein GI: 284172573
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0660374
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCCAACA GAGAACACCG ATTGGAGGGG TATCGTGACG CAGTCGAATG GCCGCTAGTC 
CGTCTCTTCG TCCGATTCAG TCGGCAGCGT CGCCACTGGT TCTCGATCGG ACTCCTCGCC 
GGCCTGTTCG AGCGGATCGC GTCGTTGATC CCGCCGTTCG TGCTGGGCGT CGCCATCGAC 
GCCGTGTTCA ACCAGACGAC GGCGTACGAC TTGCCGCTCG TCCCGAACGG CATCGTTCCC 
TCGACGACGG AGGGACAGCT CTGGTTCTCG TTTGCGCTGA TCTTCGGGTG TTACGTACTC 
ACGGCGCTGC TGGCGACGGT GCGGATGCTT TCCGTCGACT ACTTCTCCCA CCACCTGATG 
CACGTCGTTC GCACGTCGAC CTACGACAAG ATGCAGCAAC TGGACGTTCG CTTCTTCGAC 
GGCCACGAGA AGGGCGAACT CATGAGCATC CTGAACAACG ACATCTCCAA CTTCGAGCAG 
TTCTTCGACG ACGCGCTCAC GAGGGCGGTT CGGATCGGGA CGGTCCTCCT GGGAATCACC 
GGAATTCTCG TCTACCTGAA CTGGCAACTC GCCGTCGTGA CGCTGGGAGC GGTCCCCGTG 
CTCACCGCGT TCACGCTGTG GTTCATGCGT CGGGTCGAGC CGGTCTACGA CCGGATCCGA 
TCGAGCGTCG GCGGCATGAA CACCCGCCTC GAGAACAATC TCGGCGGGAT CCACCTCATC 
AAGACGATGA CGACGGAGTC CTACGAGTCC GACCGCGTCG GGGACGTCTC CTACCGCTAC 
TTCGATACGA ACTGGGAGCG GATCAAGCTC AACACGATGT ACCATCCGGG GAGTAACTTC 
ATCACGAACG CGTCGTTCGC GGCGACGTTC ATCATCGGCG GCTACTGGGT CGTCATCGGG 
CCGCCGCCGC TGTTCAGCGG GACGCTCACC GTCGGCTCGC TCGTCACCTT CCTGTTCATG 
AGCCAGCGGT TCACCGGCCC GCTCAAGCAG ATCGCGGTCA TCATCGAGCA GTACGAGAAC 
GCGCGCGCGT CCGGCAAACG CGTCGTCGGC CTCATGGACA TGCCCGTCGC CATCGAGGAC 
CGCGAGGACG CGACGGCGCT GTCCGACGTC GGCGGCCGCG TCGAGTACGA CGACGTGAGC 
TTCGCCTACG ATCCCGACGA GGAGTACGTC CTCGAGGACA TCTCGTTCGA GGTCGATCCG 
GGAGAGACGG TCGCGTTCGT CGGCCCGACC GGCGCGGGCA AGTCCACAGT GGTCCGCCTC 
CTCATGCGAA TGTACGAGAC CGACGAGGGG GAGGTCCGGA TCGACGGCCA CGACGTCCGC 
GACGTGACGC TGTCGAGTCT CCGGGACGCG ATCGGCTACG TCAGTCAGGA GAACTACCTC 
TTCGGCGGCA CCGTCAGGGA GAACATCGCG TACGGGACCT TCGACGCGAC CGACGAAGCG 
GTCGTCGCGG CCGCCGAGGC CGCGCAGGCC CACACGTTCA TCGAGGAGCT TCCGGACGGC 
TACGACACCG AGGTCGGCGA GGAAGGCGTC AAGCTCTCGG GCGGCCAGCG CCAGCGGATC 
GCGCTCGCGC GTATCATCCT CTCGGATCCG GAGATCCTCG TCCTGGACGA GGCGACCAGC 
GACGTCGACA CCGAGACGGA GATGCTCATC CAGCGCTCGA TCGAGGAGAT CACCGCCGAC 
AGGACGACGT TCGTCATCGC CCACCGGCTG TCGACGGTTC GCGACGCCGA CACCATCCTC 
GTCCTCGACG ACGGGGAGAT CGTCGAGCGG GGGAGCCACG GCGCGTTGCT CGAGCGGGAC 
GGTCTCTACG CGAACCTCTG GAAGGTGCAG GCGGGCGAGA TCAACGAGCT CCCGGAAACG 
TTCGTGGAGC GCATCACGCA GAACAACTGA 

 

Protein sequence

MSNREHRLEG YRDAVEWPLV RLFVRFSRQR RHWFSIGLLA GLFERIASLI PPFVLGVAID 
AVFNQTTAYD LPLVPNGIVP STTEGQLWFS FALIFGCYVL TALLATVRML SVDYFSHHLM 
HVVRTSTYDK MQQLDVRFFD GHEKGELMSI LNNDISNFEQ FFDDALTRAV RIGTVLLGIT 
GILVYLNWQL AVVTLGAVPV LTAFTLWFMR RVEPVYDRIR SSVGGMNTRL ENNLGGIHLI 
KTMTTESYES DRVGDVSYRY FDTNWERIKL NTMYHPGSNF ITNASFAATF IIGGYWVVIG 
PPPLFSGTLT VGSLVTFLFM SQRFTGPLKQ IAVIIEQYEN ARASGKRVVG LMDMPVAIED 
REDATALSDV GGRVEYDDVS FAYDPDEEYV LEDISFEVDP GETVAFVGPT GAGKSTVVRL 
LMRMYETDEG EVRIDGHDVR DVTLSSLRDA IGYVSQENYL FGGTVRENIA YGTFDATDEA 
VVAAAEAAQA HTFIEELPDG YDTEVGEEGV KLSGGQRQRI ALARIILSDP EILVLDEATS 
DVDTETEMLI QRSIEEITAD RTTFVIAHRL STVRDADTIL VLDDGEIVER GSHGALLERD 
GLYANLWKVQ AGEINELPET FVERITQNN