| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4436 |
|---|
| Symbol | |
|---|
| ID | 8745065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013745 |
|---|
| Strand | + |
|---|
| Start bp | 15581 |
|---|
| End bp | 16516 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646514973 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_003405920 |
|---|
| Protein GI | 284172538 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0722382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGAG CTAGCCTTAG CGAGCGCTTC CAGGACGTCG CCTTCACCAC CGCCGTCCCG
TTCAGCGACG ACGGATCGGA CGTGCTATAC GAGGACCTCG CGGACAACCT CGCGAAGCAG
TACGACGCCG GCGCGCGCCT GTTCATCCCC TGTGGCAACA CCGGAGAGTA CTACTCGCTG
ACCGACGAGG AGCGAACCGA GATCGTCGAG ACCCACGTCG AGGCGACCGG CGACGAGGCG
ATGATCGCCG GCGGCGTCGC CGGCAGCCTC GCGGAGGTCG AACGGCTCGC CGACGCCTAC
GAGGACGCCG GGGCGGACGC GATCATGGTG ATGCACCCCG ACCACACCTA CCTGCACCAG
CGCGGGCTGG CGAACTACTA CCACCGGATC TGCGACGCGA CCGACCTCGG CGTCGTCATC
TACAAGCGCG GTCCCGAGGT GCCCCGCGAC GTGATCGTCG ACCTCTCCGA GCGCGAGAAC
GTGGTCGCGG TGAAGTTCGC TGTCAACGAT ATCAAGGAGT TCTCCCAGAC CGTCGCGGAC
GCCCCGGGCG AGGTCACGTG GGTCAATGGC ATCGCCGAAC GGTACGCGCT CTCCTTCGCC
ATCGAGGGGG CGACGGGGTA CACCACCGGT CTCGGCAACT TCGCGCCGGA GGCGACGCTG
GCGCTGTTCG ACGCCGTCGA GGACGAGAAC TGGGAGCGAG CCAGATCGAT CCAGCGGCTA
CTCCGTCCGA TCGAGGACCT TCGCGAGGAA CCCGGCGAGG ACAACGCGCT CTCCGGCGCG
AACAACGTCT CCGTCATCAA ACGCGGGATG GATCTCGCCG GCTATACGGG CGGTTCCCTC
CGCGATCCGC TGGTCGATCT CTCCGCCGAC GACGCGGCGC GTCTCGAGGA GTACTACGAA
ACCGTACAGT CGACGCCGCT GCTGGAAGCG GCCTGA
|
|---|
| Protein sequence | MPRASLSERF QDVAFTTAVP FSDDGSDVLY EDLADNLAKQ YDAGARLFIP CGNTGEYYSL
TDEERTEIVE THVEATGDEA MIAGGVAGSL AEVERLADAY EDAGADAIMV MHPDHTYLHQ
RGLANYYHRI CDATDLGVVI YKRGPEVPRD VIVDLSEREN VVAVKFAVND IKEFSQTVAD
APGEVTWVNG IAERYALSFA IEGATGYTTG LGNFAPEATL ALFDAVEDEN WERARSIQRL
LRPIEDLREE PGEDNALSGA NNVSVIKRGM DLAGYTGGSL RDPLVDLSAD DAARLEEYYE
TVQSTPLLEA A
|
|---|
| |