| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4422 |
|---|
| Symbol | |
|---|
| ID | 8745050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 697067 |
|---|
| End bp | 698491 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646514959 |
|---|
| Product | protein of unknown function DUF35 |
|---|
| Protein accession | YP_003405906 |
|---|
| Protein GI | 284167628 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00766931 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACT CGCTCGGCAT CGCGGCCGTC GGGACGTACG TCCCGCGGCG GCGGATCACG
GCCGAGGCGG TGACCGAGGC GTGGAACCGC TTCGACGGCG CGGGAATCCA GGAGACCGCC
GTTCCCGGCC CCGACGAGGA CAGCCTGACG ATGGCCGCGG CGGCCGCGCG CCGCGCGCTC
GAGGCGAGCG ACGTCGACGC GGGCGAGATC GCCGCCCTCT CGTTCGCGAC GACGACCCCG
CCGCTCGAGG AGGAGGATCT CTCGGTGCGG CTGGGCGAGT TCCTCGGCGT CGGCGACGAC
GCGACGCGGA CGCTGTCGAC GGGCAGCACG AACGCGGGCG TTCGCGCGCT CACGTCAACG
CTCGCCGCGG GCGACGGCCC CGCGCTCGTC GTCGCGAGCG ACATGCCGCG GGGCGAACCC
GATAGCGCCA TCGATCACGC TGCCGGCGCC GGCGCGGCCG CCTTCGTGCT GACCCCGGAC
GCTCCCGTGA CGATCCGAGA GCAGGCGGAC CACGCGATCG ATTATCCCGG GACTCGCTTC
CGGGAGCGCG GCTCGACGAC GGTCGACTCG CTCGATATCA CGCCGTACGA TCGCTCGGCG
TACACCGAGA CGGTCGGCGG GGCCGTCGAC GGCCTCGAGG CGGATCCGTC GGCGGTGGAC
GCGGTCGCGC TGCAGGCGCC GGACGGAAAG CTCCCCTACC GCGGCGCGAA GGTCATCGGC
ACGCCGTCGG ACGCCGTCGA ACCGCACGCG GTCGTTCACT CGCTCGGCGA CCTCGGCGCC
GCCAGCGTGC CGCTGTCGAT GGCGAGCGCG CTCGTCGACG GCGTCGATCG GCTACTGGCC
GTCGGCTACG GAAGCGGCTC GACGGCGACC GCGCTCTCCG TCGAGGCGTC CGGCGCCGTT
CCGGGCGAGG TCGACCTCGC GGGCGAAGAG ACGGTGAGCT ACGCGGAGTA TCTCCGCCTG
CGCGGCGAGA TCACGAGTGG CGAACCGGAC GGCGGCGGCG CGTACGTGAG CGTCCCCTCC
TGGAAGCGAT CGGGTCCGCA GCGATATCGA CTCGAGGGCG GGCGCTGTCC GTCCTGTGGC
TCCCTGAACT TCCTCCCCGA CGGGGCGTGC CGGCAGTGTT ACGAACTCGT CGAGTACGAG
CCGGTACAAC TGGAGCGGCA GGGAACGATC GAGGCGGTGT CGGTCATCTC TCAGGGCGGC
GCACCGCCGG AGTTCGCGGA GCTCCAGGCG CGCGCCGGCG ATTACGCGAC GGCGATCGTC
GCGTTCGACG GCCCCGACGG CGACACGGCC AGCGCGCCGG TGCTCGTCGT CGACGCCGAC
GCGGAGTCGG TCGACGTCGG CGACCGCGTC GAAGCGACGG TGCGGCGCAT CTACACGCAG
GAAGGAGTGA CCCGCTACGG GCTGAAGGTC CGCCCGCTCG ACTGA
|
|---|
| Protein sequence | MSDSLGIAAV GTYVPRRRIT AEAVTEAWNR FDGAGIQETA VPGPDEDSLT MAAAAARRAL
EASDVDAGEI AALSFATTTP PLEEEDLSVR LGEFLGVGDD ATRTLSTGST NAGVRALTST
LAAGDGPALV VASDMPRGEP DSAIDHAAGA GAAAFVLTPD APVTIREQAD HAIDYPGTRF
RERGSTTVDS LDITPYDRSA YTETVGGAVD GLEADPSAVD AVALQAPDGK LPYRGAKVIG
TPSDAVEPHA VVHSLGDLGA ASVPLSMASA LVDGVDRLLA VGYGSGSTAT ALSVEASGAV
PGEVDLAGEE TVSYAEYLRL RGEITSGEPD GGGAYVSVPS WKRSGPQRYR LEGGRCPSCG
SLNFLPDGAC RQCYELVEYE PVQLERQGTI EAVSVISQGG APPEFAELQA RAGDYATAIV
AFDGPDGDTA SAPVLVVDAD AESVDVGDRV EATVRRIYTQ EGVTRYGLKV RPLD
|
|---|
| |