| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4411 |
|---|
| Symbol | |
|---|
| ID | 8745039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 684033 |
|---|
| End bp | 685166 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 646514948 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003405895 |
|---|
| Protein GI | 284167617 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA ATACCGATAC TACGGCTGAT ACACCGACAC GCAGAGACAC GCTGAAATAC
GGCGGCGCTG TGGTCGGTGG CGGGCTGCTC GCCGGCTGTG TGGCTAGCCC GGAGGACGAA
ACGAGCGAAA CGGACGGATC GTACTCGGTC ACGATGGAAC CCGTCGGTAC CGTCGAGTTC
GACGAGGTTC CCGAAACGTG GCTCCCATAC ACGGGCGATT ACGCGGACAT GGGCGTCGCG
CTCGGGCAGG GTGACGGGCT CTCGGCTATC GGCATCCGCG CCCGGTTCGC CTCACACCTG
TACGAGGAAC TCCCCGGCGT CTCCGTCAAC GGAAGCGAAC TCACCGAACT CTATCAGGAC
GGCACCGGCA AAGAGATCTT TTACGAACTC AAGGCCGACG TTCACCTCAT CGATCCGAAC
TTCATGGTGA ATCGCCTCCA GTGGGGGCAG GCTGACGTCG ACGAGATCCG AAACGCTGTC
GCGCCGTTCG TGGGGAACAC GATCTTCTCG CGTGTTTACG ACTGGCACGA CTACGCCGAC
TACACGCTGT ACGAAGCCTT CGAGAAGATC GCCCAGGTGT TCCAAGCGCA GGATCGCTAC
GAGGCGTTCG CGGCGTATCA CGACGAGGTG CTCGCGGACG TCCAAGCGCG CCTTCCGAGC
GAATCCCCGA CCATTGCGGT TCTCTACCCG GATGGAGTCC CGCCGGAATC GTTCTACCCG
TACCTGATCG GCTCCGGGAC ACAGTCCAAA CACTGGAACG ATCTGAACGT TGAGGATGGT
CTCGCCGAGA ACGGCGTCGT GGATACGCAA GCCGGCGGGG GGACTATCGA CTACGAAACG
CTGTTGGAGA TCGATCCGGA CGCCCTCGCG ATCAGGTTGC AAGGCGAGAT TACACAGGAG
TATTTCGACG CCGAAATCGT CTCCCATCTC GAGGACCACA GCGTCGCGAG CGAGCTTCAG
GCGGTTCAAA ACGACCGCGT CATCTACGGT GGCCTGACCT ACCAGGGGCC GATCATCCAC
CTCTTCCAAC TCGAGCAGGC AGCCCGTGGA CTGTATCCCG ACGAGTTCGG AGGCGAACAG
CTATTCGACC GCCAGCGCGT TGCGGACATC GTCACCGGGG AATTTCAGCA ATGA
|
|---|
| Protein sequence | MSDNTDTTAD TPTRRDTLKY GGAVVGGGLL AGCVASPEDE TSETDGSYSV TMEPVGTVEF
DEVPETWLPY TGDYADMGVA LGQGDGLSAI GIRARFASHL YEELPGVSVN GSELTELYQD
GTGKEIFYEL KADVHLIDPN FMVNRLQWGQ ADVDEIRNAV APFVGNTIFS RVYDWHDYAD
YTLYEAFEKI AQVFQAQDRY EAFAAYHDEV LADVQARLPS ESPTIAVLYP DGVPPESFYP
YLIGSGTQSK HWNDLNVEDG LAENGVVDTQ AGGGTIDYET LLEIDPDALA IRLQGEITQE
YFDAEIVSHL EDHSVASELQ AVQNDRVIYG GLTYQGPIIH LFQLEQAARG LYPDEFGGEQ
LFDRQRVADI VTGEFQQ
|
|---|
| |