| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4400 |
|---|
| Symbol | |
|---|
| ID | 8745028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | + |
|---|
| Start bp | 669663 |
|---|
| End bp | 670460 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646514937 |
|---|
| Product | 4-hydroxy-2-oxovalerate aldolase |
|---|
| Protein accession | YP_003405884 |
|---|
| Protein GI | 284167606 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.125493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACC TCAAGCAAAA ATTCCACACG GAAACGGATA TCGCCGGTGC GTGGCTCTCG
ATCGGCCACC CCACCGTCGC AGAAGTAACG GCAACTGAAG GGTTCGACTT CGTCCTCGTC
GACACCGAAC ACACGCCGTT AACGCTGGAA ACGGTCGAAA ACATGTCACG CGCCGTCGAC
GGCGCCGACG GAGAGACGGA AACGCTCGTC CGGGTCCCGT CGAACGATCC CGTCCGGATC
AAACGCGTCC TCGATATCGG CGTCGCCGGA ATAATGGTCC CGATGATCGA AACGGCCGAC
GAAGCCCGCG AGGTCGTCGA TGCGGTCACC TATCCGCCGA ACGGGATTCG CGGAGTCGCG
TCGGGCCGCG CGTCGGCGTA CGGCGACGAC TTCCAGGAGT ACGTCGAAAA CGCCAACGAG
TCGATCGCCA CCGTCGTCCA GATCGAGACC CAGACCGGCC TCGATAACGC TCGAGAGATC
GCCGCGGTCG ACGGCATCGA CGCCGTGTTC GTCGGCCCGG CAGATCTGTC CGCGAATCTC
GGCATCTTCG GCGAGTGGGA GAACGATCGG TTCGACGATG CGATCGAACG CGTCGTCACC
GCCGGCGAGG ACGCCGACGT CCCGGTCGGA ACGTTCGTCG TCGATCCCGG CGACATCGAA
ATGCGCGTCG AACAGGATTT CGACTTCCTC ATCGTCGGAA AGGATACGAA CCACCTGTCG
TCCGGCAACG AGGAGGTCCG CCAGCGCTAC GCCGAAACGG TGTCACAGCA GGCGACACCG
TCCATGAGCG AAGACTGA
|
|---|
| Protein sequence | MKNLKQKFHT ETDIAGAWLS IGHPTVAEVT ATEGFDFVLV DTEHTPLTLE TVENMSRAVD
GADGETETLV RVPSNDPVRI KRVLDIGVAG IMVPMIETAD EAREVVDAVT YPPNGIRGVA
SGRASAYGDD FQEYVENANE SIATVVQIET QTGLDNAREI AAVDGIDAVF VGPADLSANL
GIFGEWENDR FDDAIERVVT AGEDADVPVG TFVVDPGDIE MRVEQDFDFL IVGKDTNHLS
SGNEEVRQRY AETVSQQATP SMSED
|
|---|
| |