| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4383 |
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| Symbol | |
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| ID | 8745011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013744 |
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| Strand | - |
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| Start bp | 649705 |
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| End bp | 651441 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646514922 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_003405869 |
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| Protein GI | 284167591 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00140196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCACGC TTACCGGAGG CGAGATTATC GCCAAGTATC TGGAGAAAGA GGGCGTAGAG
TACCTGGTCG GCATTCCCGG ACACGGGAGC ACGAACCTCC TCGACGCGTT CAACGACTCC
GAGGTCGAGG TCATCCAACC GCGACACGAG GAGGGCGCGA CCCACCTCGC GGACGGCTAC
GCGCGTGCCA GCGGCGATCC GCTCGCCGTG TTCACGTCGA TCGGTCCCGG CGCGACGAAC
ACGGTCACCG GCGTCGCAAC GGCCTACGTC GACTCGATCC CGATGGTCGT CTTCACGGGC
GCGCCCCAGA CCCACGAGTA CGGCCAGGGG ATCCTCCAGG AGATCGAACG ACAGAAACCC
GGCGACTTCC CGAGCGTAAT GGAGCCGGTC ACGAAGAAGA GCTTCGTCGT GAACGACGTC
GAACAACTCC CTCGAGTCCT CAGACGTGCG TTCCAGGTCG CGACGACGGG CCGACCGGGC
CCGGTCCACG TCGACGTGCC GATGGACGTA CAGGGCGGCG CCGCAGACGT CGAGATTCCG
GAGCCGGCGG AGACGCGAAC CCACAGCCGT CCCGGCGGCG ATCCGGAGTC CGTCTCCGAG
GCCGCCGACC TGCTCGCGGA GGCCGACCGG CCGGTCATCG TCCCCGGCGG CGGCTGTATG
CTCGGCGAGG CCTGGGACGA GGTCCAGGAC CTCGCGGAGC ACCTCAAGGC GCCCGTCATC
CCGACCTTCC AGGCGAAGGG GATCATCCCC GAGGACCACG AGCTGTTCGT CGGCTACGCG
GGCTGGATCG GCTCGACGGC CGGCAACGAA CTCGCGAGCA ACGCGGACGT CGTGCTCGCG
ATCGGCTGTC GGTTCACGGA CATGCACACG TCCTCGTTCG AACAGGGCGT GAGCTTCGAG
ATCCCGCCGA GCAAGCTCAT CCACGTCGAC ATCGACAACG AGGAGATCGG TAAGAACTAC
CCCGTCGAGG TCGGCATCCT CGGCGACTCG AAGGTCGTCA CGCGACAGCT CCACGAGGCG
GTCGCCGACC GCGTCGACCC CGTCGGTACC GAAGACAACG AGTATTACGA CGAGATCCAG
CGGCTGTGGG CCGAGTGGCA GGAACTCGTC GAGGAGCGAC AGACGGATGA CGTGCCGATG
TCGATCTCGC GCGCCCTGGC GAGTCTGCGC GAGGCGCTGG ACCGCGACGG CATCGTCGTC
TCGAGCGCCG GTCAGCCACA GGAGGTCACG AACCCGCAGT TCCCGGTGTA CGAGCCCCGG
ACGAACATCT CCTGTGGCGG CTTCTCGACG ATGGGCTTCG GCGTCTCCGC CGCCATCGGT
GCGAAGCTCG CTCGGCCCGA CAGGCAGGTC GTCGACGTGG AGGGCGACGG CAGCTTCATG
ATGTGTAACC AGGAGGTCAA CTGCGCGGTC GAACACGACG TCGACGTCAC CTGGCTCGTC
GTGAACAACG ACGGCTGGAA GTCGATCCGG AACCTCCAGG TCGACAAGTA CGGCTGGGAC
CGCGTCCTCA ACACGCCGTT CGAAGAGGGC GTCGACTTCG TCCAGATGGC CGAATCGTTC
GGCGTCGAGT TCTCCGAGCG CGTCATCAAA CCCGAGAACC TCACCGAGAC GCTCGAGGAG
GCCCTCGCCC ACGACGGGCC CGCGCTCGTC GAAGCCATCG TCGAACCGGA CAACGAAGAT
TCCGGTGCGA TCGTCACCGG CAAGTGGGAC CTCGCCGACC TCGAGCGGGA CGACTGA
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| Protein sequence | MPTLTGGEII AKYLEKEGVE YLVGIPGHGS TNLLDAFNDS EVEVIQPRHE EGATHLADGY
ARASGDPLAV FTSIGPGATN TVTGVATAYV DSIPMVVFTG APQTHEYGQG ILQEIERQKP
GDFPSVMEPV TKKSFVVNDV EQLPRVLRRA FQVATTGRPG PVHVDVPMDV QGGAADVEIP
EPAETRTHSR PGGDPESVSE AADLLAEADR PVIVPGGGCM LGEAWDEVQD LAEHLKAPVI
PTFQAKGIIP EDHELFVGYA GWIGSTAGNE LASNADVVLA IGCRFTDMHT SSFEQGVSFE
IPPSKLIHVD IDNEEIGKNY PVEVGILGDS KVVTRQLHEA VADRVDPVGT EDNEYYDEIQ
RLWAEWQELV EERQTDDVPM SISRALASLR EALDRDGIVV SSAGQPQEVT NPQFPVYEPR
TNISCGGFST MGFGVSAAIG AKLARPDRQV VDVEGDGSFM MCNQEVNCAV EHDVDVTWLV
VNNDGWKSIR NLQVDKYGWD RVLNTPFEEG VDFVQMAESF GVEFSERVIK PENLTETLEE
ALAHDGPALV EAIVEPDNED SGAIVTGKWD LADLERDD
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