| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4354 |
|---|
| Symbol | |
|---|
| ID | 8744982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 615731 |
|---|
| End bp | 617248 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646514893 |
|---|
| Product | Amidase |
|---|
| Protein accession | YP_003405840 |
|---|
| Protein GI | 284167562 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.146347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAGT CACCACCGAA CGTTCAAGCA CCGACGCCGG AGGAGATCCG AGCGTACGCG
GAACAGCACC ATATCGAGTT GAGCGACGCG GAAGTAGCGG ACTTCGAAGC CGTCATCGCC
GAGACGCTCG CCGGCTACGA ACGGTTGGAC GAGCTCCCGG ACTATCGACC GCGGGTCGAG
TACACTGACC GCGATCCGGG GCACAGACCG GGACGCGACG AGGATCCGCT CAACGCCTTC
GTCACGAAAT GCGAGGTACA GGGAGCCGAC GACGGTCCGC TCGCCGGCTA CGAGGTCGGA
CTGAAGGACA ACGTCAACGT GGCCGGCGTC GAGCTGACGC TCGGCTCGAA GCTCTTCGAG
GGATACGTCC CGTCGACCGA CGCGACGATC GTCACGCGGC TCCTCGACGC CGGCGCGACC
ATCACCGGAA AGCTGAACAT GGAAGACATG GCGTTCTCCG GGAGCGGCGA ACTCTCCGCG
ACCGGGCCGG TGTTGAACCC CGTCGATTCC GACTACATCG CGGGCGGCTC GTCCTCGGGC
TCGGCTGCGG CCGTCGGAAA CGGGGACGTC GACGTCGCCA TCGGCGGCGA CCAGGGCGGC
TCAATCCGGA TCCCGGCCGC CTGGAGCGGA ATCGTCGGTC ACAAGCCCAC TCACGGACTC
GTTCCCTACA CCGGTATCGC CGGTCTCGGT CGGTCGTTCG ACCACGCCGG ACCGATGTGT
TCCACGGTCG AGGACTGCGC GCGAGTCCTC GACGTGATCG CCGGGAAAGA CGGCCTCGAT
CCGCGTCAGG GCGAGGTCCC GACCGACGAC TACCTTGAGG CGCTTTCGGA CGATCCGTCG
GACGTGACCG TCGGCGTCGT CGAGGAGGGC TTCGGTCGAG AGACGAGCGA ACCGGGCGTT
GACGAGACCG TCCGCGACGC GCTCGCCGAC TTCGAGGACG CCGGCGCGAC GGTCGAAGCG
GTGTCCGTCC CGATGCACGT AGACGGCCTC ACCATCTGGA ACGCCATCGC GCTCGAGGAG
ACGTCCGCGA CAGTCGACGG CGAGTGCGTC GGCCACTACG GAAACGGGTT TTACGACACG
CAGCTCGCCG AAGCCTTCGG ACGGGCGCGA CGCGCCCACG CCGACGACTA CATCACAACG
CTGAAACTCA CGCTCGTCCT CGGAGAGTAT CTGTCGGATG AGTACCGCGG CCGCTACTAC
GCGAAAGCGC AGAATCTCAG TCGAAAGCTG GCCGCGGAGT ACGACGAGGC GCTCGAGGAC
ATCGACGTGC TCGCGATGCC CACGACCCCA CAAACCGCAC ACGAAGTCGA CGAGACGATT
TCGCGCGTCG AGGCGATCGA GAGAGCGCTG AACATGTTAC ACAACACCTC CCCATTCGAC
GTGACGGGCC ATCCGGCGAT ATCGGTACCC GCTGGAACTG CTGGCGGGCT ACCGGCCGGC
CTCATGCTAA TCGGTGACCG ATTCGACGAC GCGACGGTGC TCTCGAGTGC TCGCGCGTTC
GAGGCGAGCC ACGAGTAG
|
|---|
| Protein sequence | MSESPPNVQA PTPEEIRAYA EQHHIELSDA EVADFEAVIA ETLAGYERLD ELPDYRPRVE
YTDRDPGHRP GRDEDPLNAF VTKCEVQGAD DGPLAGYEVG LKDNVNVAGV ELTLGSKLFE
GYVPSTDATI VTRLLDAGAT ITGKLNMEDM AFSGSGELSA TGPVLNPVDS DYIAGGSSSG
SAAAVGNGDV DVAIGGDQGG SIRIPAAWSG IVGHKPTHGL VPYTGIAGLG RSFDHAGPMC
STVEDCARVL DVIAGKDGLD PRQGEVPTDD YLEALSDDPS DVTVGVVEEG FGRETSEPGV
DETVRDALAD FEDAGATVEA VSVPMHVDGL TIWNAIALEE TSATVDGECV GHYGNGFYDT
QLAEAFGRAR RAHADDYITT LKLTLVLGEY LSDEYRGRYY AKAQNLSRKL AAEYDEALED
IDVLAMPTTP QTAHEVDETI SRVEAIERAL NMLHNTSPFD VTGHPAISVP AGTAGGLPAG
LMLIGDRFDD ATVLSSARAF EASHE
|
|---|
| |