Gene Htur_4329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_4329 
Symbol 
ID8744957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013744 
Strand
Start bp587790 
End bp589841 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content63% 
IMG OID646514870 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003405817 
Protein GI284167539 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.213628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTG GTGGGCAACG ATCTATAACT GATGTGATCG GTGACGTCAC CCGAGCGTTG 
GTTCCGACCA ACACCGAACC CGAGATGCGT CGCCGCGTTT GCGAGGCGTT CGTTTCATCG
GAGGTGTACT CAGTTTCGTG GATCGGCCGC TATCTGCCGG AGCGAGACGA CGTGATTCCG
AACGCCTCCG CCGGGATTGC GGAGCAGACG CTCGAGGACG TCTCCATCGC TGCGGAGTCG
CCTCGAGCGG AGCTGACGAC TGAAGCGGTG CGCACGCGGG AGCTGACGGT CCGACGGGAC
CTCGTCGACG ACCCGCCTTG TGAGGAGTGG CGCAACCACG CCCTCGAGCA CGACTACCGA
ACGTGTGCGG CGATCCCGCT CGTTTACGAG GAGACGCTGT ACGGCGTCTT GCAGCTGGCT
ACCGACCGGC CGCACGGATT CGGGACGTCC GAGCGAGAAG CGCTTACGGA GCTGGGCGTC
ACGATCGCCT ACGCCCTCGA CGATGCGGAG TCGCCCGCGA ATACTGACCG CGACGAGCGC
GAGGGAGCGG CGGAAGAGAT GACGGAGGTG CCCATCGAGT CCGAGCAGAA ACGACGGCTC
TACGAGACCA TCATCTCCAG TACGCCCGAC CTCGTCTACG CCTTCGACCT CGACTACCGC
TTCATCTTCG CCAACGACGC GCTGCTGGAG ATGTGGGGTC AAACCTACGA CGAGTCCATC
GGCAACACCT TGCGAGAAAA CGGCTACGAG CCGTGGCACG CGGAGATGCA CGAACGCGAG
ATCGACCGGG TCGTGGAGAC GAAAGAGCCC ATCCGCGGCG AAGTCGCGTT CGAACACGTC
GAACGCGGCC GCCGGATCTA CGACTACATC TTCGCACCGG TACTCGACGA CGAGGGCGAG
GTCGAAATCA TCGCCGGGAC GACGCGCGAT ATCACCGAGC GCAAGGAGGC CGAGGAGGCG
CTTCAGAAGA GCAAGGAGCG ATTCAGAGCG TTGGTCACTG CGAGTTCGGA CGTCGTCTAT
CGCATGAGTC CGGACTGGAG CGAAATGCAC GAACTCGAGG GCAAGGAATT CATCGCCGAT
ACGCAGGAAT CGACCAGCGA CTGGCTCGAC AAATACATCC ATCCGGACGA TCAGGAACGC
GTCACGGCGG CCATCGACGA AGCCATCCGG TCCAAGAGCA CCTTCGAACT GGAACACCAG
GTAGAGCAGG TCGACGGCAG CCTGGGCTGG ACGTTCTCGC GTGCGGTGCC AATGTTGGAC
GAGGACGGCG ACATCGTCGA GTGGATCGGG ATGGCGAGCG ACATCACCGA ACGCAAGGCG
TACGAGCGGG AACTCGAACA AACCAACGCG CAACTGAAAC GCTCGAACCG AGAACTCAAG
CGATTCGCCC ACGCCGCCTC CCACGACCTC CAGGAGCCGT TACGGATGGT CTCGAGCTAT
CTCCAGCTAC TCGAACAGCG GTACGGAGAC GACCTCGATG CCGACGCGAC GGAGTTCATC
GAGTTCGCCG TCGACGGCGC GGATCGCATG CGGGCGATGG TCGACGCGCT GCTCGAGTAT
TCGCAGGTGA GCACCCGTGA GAACGACTTC GAGACGGTCG ACTGCGAGGC GGTCCTCGAG
CAGGCGACGG AGAATCTCCA GATGGCGATC GAGGAACGCG AGGCCTCCAT CACGTCGGAC
GAACTGCCCA CTGTGAGCGG CGACGAACGC CAACTGATTC AACTCTTCCA GAACCTCCTC
GATAACGCCA TCACGTACGC GGGCGATGCG CCGCCGACCG TCCACGTCTC CGCCGAGCGA
GGGGACGGCG AGTGGCTGTT TTCGGTCCGC GACAACGGGA TCGGGATCGA CCCGGAGGAA
ACGGACGACA TCTTCGCGGT ATTCAACCGC CTGCACGCTC CCGACGAGTA CGGGGGAACG
GGTATCGGTC TCGCTATCTG CAAGCGCATC GTGACGATTC ACGACGGCCG TATCTGGGTC
GAGTCCGAAC CCGGCGAGGG AACGACGTTC TTCTTCACCA TTCCTGATAG TACTGGAGAA
GGGACGACGT AG
 
Protein sequence
MSRGGQRSIT DVIGDVTRAL VPTNTEPEMR RRVCEAFVSS EVYSVSWIGR YLPERDDVIP 
NASAGIAEQT LEDVSIAAES PRAELTTEAV RTRELTVRRD LVDDPPCEEW RNHALEHDYR
TCAAIPLVYE ETLYGVLQLA TDRPHGFGTS EREALTELGV TIAYALDDAE SPANTDRDER
EGAAEEMTEV PIESEQKRRL YETIISSTPD LVYAFDLDYR FIFANDALLE MWGQTYDESI
GNTLRENGYE PWHAEMHERE IDRVVETKEP IRGEVAFEHV ERGRRIYDYI FAPVLDDEGE
VEIIAGTTRD ITERKEAEEA LQKSKERFRA LVTASSDVVY RMSPDWSEMH ELEGKEFIAD
TQESTSDWLD KYIHPDDQER VTAAIDEAIR SKSTFELEHQ VEQVDGSLGW TFSRAVPMLD
EDGDIVEWIG MASDITERKA YERELEQTNA QLKRSNRELK RFAHAASHDL QEPLRMVSSY
LQLLEQRYGD DLDADATEFI EFAVDGADRM RAMVDALLEY SQVSTRENDF ETVDCEAVLE
QATENLQMAI EEREASITSD ELPTVSGDER QLIQLFQNLL DNAITYAGDA PPTVHVSAER
GDGEWLFSVR DNGIGIDPEE TDDIFAVFNR LHAPDEYGGT GIGLAICKRI VTIHDGRIWV
ESEPGEGTTF FFTIPDSTGE GTT