| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4260 |
|---|
| Symbol | |
|---|
| ID | 8744888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 527939 |
|---|
| End bp | 529228 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646514805 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003405752 |
|---|
| Protein GI | 284167474 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG GAACTGAACT GAAACAGGGG ATTCGCGAAC ACCTCGAGCA GTTCTCGCTG
CACGTCCTGC TGGTGTTCGC GACGGGGCTG ACGATCGGTT CGGAGCGTAC CGTCGTCCCC
GTCCTCGGCG AGGACGTGCT CGGCGTCGAG TCGTTCCTCG TCATCGGCTC GTTCGTCGTC
TCGTTCGGCT TCGTCAAGGC GCTGCTCAAT CTCTACGCCG GCAAGTGGGG CGAGGAGTAC
GGTCGCAAAC CGGTGCTCGT GCTCGGCTGG CTCACCGCCC TCCCGATCCC GATCGTTCTC
ATCTACGCCC CAAGCTGGAG CTGGATCACC GTCGGGAACG TCCTGCTTGG GATCAATCAG
GCATTGACTT GGAGCATGGC GATCAACGCG AAAATCGATC TCGCGGGACC CGACCAGCGC
GGGCTCGCCG TCGGCATCGA CGAGGCGTTC GGCTACACCG GCGTCGCGGC AGGCGCGTGG
ATTACGGGCG TCATCGCCGG CCAGACCAGC CTCCGGCCGG AGCCGTTCTA CTTCCTCGCG
GCCGTCGTGG TGTTCGCGTT CCTCGTTTCC GTTTTCCTCA TCAAGGAGAC GGTCCAGCTC
GCACAGATGG AGGCCGACGA CGACCACCGC GACGCGAACC TCCCGTTCGA CGAGGTGCTC
AAGCGAGCGA CCTACGGCGA CAAGACGCTG TTCGCGGCGG CCCAGGCCGG CCACGTCGAG
AACTTCGTCG ACACGCTGTT CTGGATCGCG GTGCCGCTGT ATCTCACGAG TCAGGGGCTC
GCGATCGAAG CCGTCGGCGT CGTCGTCGGC GTCCACAGCG CGATGTACTT CCTCCAGATC
GGAACCGGGG GCCTCGCCGA TCGCATCGGC CGCCGCCCGC CCGTCGTCGC GGGAATGCTC
CTCGCCGGTG CGGGCGTTCT CGGAATGGTG TTCGTCGAGA GCTACCTCCC GTGGGCTGTT
CTGGCTGGCG TCTCCGGGCT GGGGATGGCG CTACTCTACC CGAACCTGAT GACGGTGCCG
AGCGATGCGG CTCATCCGAC GTGGCGGTCG GCCGGCATGG GCGTCTACCG GATGTGGCGC
GACGCCGGCT ACGGTGTCGG TGCGATCCTG ATCGGCCTCT CGATGGAGTT CGTGAACGCC
GAAGCCGCAT TCTACATGAC CGCGATCCTG ATGTTCCTTT CTGGTGCCGT CGTGTACGTG
TGGATGGAGG AGACCCATCC CGAATTCGGC ACGCACGAAC CGCCGGCACC GGCTCCGGAG
ACGCCACACG GCGCGGCGCC TGAAGACTGA
|
|---|
| Protein sequence | MSEGTELKQG IREHLEQFSL HVLLVFATGL TIGSERTVVP VLGEDVLGVE SFLVIGSFVV
SFGFVKALLN LYAGKWGEEY GRKPVLVLGW LTALPIPIVL IYAPSWSWIT VGNVLLGINQ
ALTWSMAINA KIDLAGPDQR GLAVGIDEAF GYTGVAAGAW ITGVIAGQTS LRPEPFYFLA
AVVVFAFLVS VFLIKETVQL AQMEADDDHR DANLPFDEVL KRATYGDKTL FAAAQAGHVE
NFVDTLFWIA VPLYLTSQGL AIEAVGVVVG VHSAMYFLQI GTGGLADRIG RRPPVVAGML
LAGAGVLGMV FVESYLPWAV LAGVSGLGMA LLYPNLMTVP SDAAHPTWRS AGMGVYRMWR
DAGYGVGAIL IGLSMEFVNA EAAFYMTAIL MFLSGAVVYV WMEETHPEFG THEPPAPAPE
TPHGAAPED
|
|---|
| |